Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0387 |
Symbol | |
ID | 5372562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 432944 |
End bp | 434350 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640828586 |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_001364619 |
Protein GI | 152998938 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAACG CAAAGACCTT GTACCAAAAA GTATGGGATG CACATATCGT TGCTGCTCCC GAGGGCGAAG CGCCGGTCAT TTATGTCGAC AGACATTTAG TCCATGAAGT GACGTCACCT CAAGCATTCA GCGGTTTGAA GGTCGCGGGC CGTAAGCTGC GCGCGCCGGA AAAAACCTTT GCGACTATGG ATCATAATAC TTCTACTCGC AGCGCCAGTT TAGATGCCCT AAGCCCGATG GCGCGCACTC AGGTGGAAAC CCTAGCGCAA AACTGTAAAG ACTTTGGCGT GCGCTTATAT GATATTCACC ATCCTAATCA AGGGATTGTG CATGTGATGG GCCCTGAGCT AGGCATTACC TTACCCGGCA CTGTGATTGT GTGTGGCGAT TCCCATACCG CCACCCACGG CGCCTTTGGC GCATTGGCGT TTGGGATTGG CACTTCGGAA GTTGAGCACG TGTTAGCAAC GCAAACGCTG CGTCAGTTAA AAGCTAAAAC CATGAAGATT GAAGTGCGTG GTCATGTCAC CGATGGCGTG ACCGCCAAAG ATATCGTCCT CGCTATTATT GGCAAAATCG GCATGGATGG TGGCACGGGT TACGTGGTGG AGTTCTGCGG TGAGGCGATC GAAGCCCTGT CGATGGAAGG CCGCATGACA GTGTGTAACA TGGCGATTGA GATGGGGGCT AAGGCGGGCA TGGTCGCGCC GGATCAAACC ACTTTCGATT ATTTAGCAGG CCGCGAGTTT GCGCCAAAGG GCGAAGATTG GGCAGAGGCT GTCGCTTACT GGAAAGCCAT TAAAACCGAT GACGGCGCCG TGTTTGATGC TATCGTTGAG TTAGATGCTG CCGATATTGC GCCACAATTG ACTTGGGGTA CTAACCCAGG CCAAGTGGTG GCAATCGATG GCAAAGTACC TGACCCCATT AATGAAGCCA ACCCAAGCAC CCGAGCTAGT ATGGAAAAGG CTTTAGAATA CATTGGCCTG AGTGCGGGTA CGCCGATGAC AGATATCAGT ATCAACAAGG TGTTTATCGG TTCATGTACT AACTCACGGA TTGAAGATTT ACGCAGCGCC GCTGTACATG CCAAGGGCCG TAAAGTCGCG AGTGGCGTCA CCGCCATTGT CGTTCCAGGT TCTGGCCAAG TGAAAGCGCA AGCCGAAGCC GAAGGCTTAG ATAAAATCTT TATCGAAGCG GGATTTGAGT GGCGTTTACC GGGTTGTTCT ATGTGTTTAG CGATGAACGA TGACAGATTA GAAGCGGGCG ATCGCTGCGC GTCGACCAGT AATCGTAACT TCGAAGGTCG CCAAGGTCGT GGCAGTCGTA CCCATTTGGT GAGTCCTGCA ATGGCTGCAG CCGCTGCGGT GGCAGGGCAT TTTGTCGATA TTCGTAAACC TTACTAA
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Protein sequence | MTNAKTLYQK VWDAHIVAAP EGEAPVIYVD RHLVHEVTSP QAFSGLKVAG RKLRAPEKTF ATMDHNTSTR SASLDALSPM ARTQVETLAQ NCKDFGVRLY DIHHPNQGIV HVMGPELGIT LPGTVIVCGD SHTATHGAFG ALAFGIGTSE VEHVLATQTL RQLKAKTMKI EVRGHVTDGV TAKDIVLAII GKIGMDGGTG YVVEFCGEAI EALSMEGRMT VCNMAIEMGA KAGMVAPDQT TFDYLAGREF APKGEDWAEA VAYWKAIKTD DGAVFDAIVE LDAADIAPQL TWGTNPGQVV AIDGKVPDPI NEANPSTRAS MEKALEYIGL SAGTPMTDIS INKVFIGSCT NSRIEDLRSA AVHAKGRKVA SGVTAIVVPG SGQVKAQAEA EGLDKIFIEA GFEWRLPGCS MCLAMNDDRL EAGDRCASTS NRNFEGRQGR GSRTHLVSPA MAAAAAVAGH FVDIRKPY
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