| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0278 |
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| Symbol | |
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| ID | 4117767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 287254 |
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| End bp | 288663 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638035067 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_643066 |
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| Protein GI | 108803129 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAAGA AGAAACCCAG GACGCTCGTA GAGAAGATAT GGGAGCGACA CGTGGTGCGG
CGGGCCGAGG GGGAGCCCGA CCTCCTGTAC GTGGATCTCC ACATGGTCCA CGAGGTCACG
AGCCCCCAGG CCTTCGAGGC GCTGCGGCTC GCCGGCAGGA GGGTCAGGAG GCCCGACCTC
ACCGTGGCCA CCATGGACCA CAACGTCCCG ACCACCGACG TGCGCCTCGG GGTCAGGGAC
AGGGTCTCGG CCCGGCAGAT GGAGGCGCTC AGGAAAAACT GTGAGGAGTT CGGGATACAG
CTGCACGAGT GGGGCTCGCC CGGGCAGGGC ATCGTGCACG TCATCGGGCC GGAGATGGGG
CTCACCCAGC CGGGGATGGT CATCGTCTGC GGCGACTCCC ACACCTCCAC CCACGGCGCC
TTCGGGGCCC TGGCCTTCGG CATCGGCACC AGCGAGGTCG AGCACGTGCT CGCCACCCAG
ACCATCCCGC AGCGCAGGCC CAAGACCATG GCCATAACCG TCGAGGGCGA GGCCCCGCCC
GACGTGACGG CCAAGGACAT CATGCTCGGC ATCCTGCACC GCATCGGCAC CGGCGGCGGG
GTCGGGCACG CCATCGAGTA CCGGGGCGAG GCGATCCGCA ACCTCTCCAT GGAGGGGCGG
ATGACCATCT GCAACATGAC CATCGAGGGC GGCGGTCGCG CCGGGATGGT CGCCCCCGAC
GAGAAGACCT ACTCGTACAT CGAGGGCCGC CCCCACGCCC CGAAGGGCAG GGCCTGGGAG
GAGGCGCTCG AGTACTGGCA GAGCCTCCCC ACCGACGAGG GCGCGACCTT CGACAAAGAG
GTCGTCATAG ACGCCGCCGA GCTCGTCCCC TATGTCTCCT GGGGCACCAC CCCCGCGCAG
ACCGTCCCGC TCGACGGGGA GGTCCCCGAG CCCCAGAACG AGGGCCACGA GCGCGCGCTC
AGGTACATGG GCCTCAGGCC CGGCACCCCC ATAAGGGAGA TAGAGGTGGA CACCGTGTTC
ATCGGGTCGT GCACCAACGC CAGGATAGAG GACCTGCGCG CCGCGGCCCG CGTGCTCGAG
GGCCACAAGG TGAAGGAGGG CATCCGTGCG ATGGTCGTCC CCGGCTCCAT GCGCGTGAAG
AAGCAGGCCG AGGAGGAGGG GCTCGACGAG ATCTTCAAGA AGGCCGGTTT CGAGTGGCGC
AACGCCGGCT GCTCCATGTG CCTCGGTATG AACCCGGACA TCCTCTCGCC CGGCGAGCGC
TGCGCCTCCA CCTCGAACCG CAACTTCGAG GGGCGGCAGG GCAAGGGCGG CAGGACGCAC
CTCGTGAGCC CGGTGGTCGC GGCGGCGACG GCGGTGATGG GGCGCTTCGC CTCGCCCTCG
GAGCTCGGCG TCCCCGTGGA GGTGGGCTAG
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| Protein sequence | MEKKKPRTLV EKIWERHVVR RAEGEPDLLY VDLHMVHEVT SPQAFEALRL AGRRVRRPDL
TVATMDHNVP TTDVRLGVRD RVSARQMEAL RKNCEEFGIQ LHEWGSPGQG IVHVIGPEMG
LTQPGMVIVC GDSHTSTHGA FGALAFGIGT SEVEHVLATQ TIPQRRPKTM AITVEGEAPP
DVTAKDIMLG ILHRIGTGGG VGHAIEYRGE AIRNLSMEGR MTICNMTIEG GGRAGMVAPD
EKTYSYIEGR PHAPKGRAWE EALEYWQSLP TDEGATFDKE VVIDAAELVP YVSWGTTPAQ
TVPLDGEVPE PQNEGHERAL RYMGLRPGTP IREIEVDTVF IGSCTNARIE DLRAAARVLE
GHKVKEGIRA MVVPGSMRVK KQAEEEGLDE IFKKAGFEWR NAGCSMCLGM NPDILSPGER
CASTSNRNFE GRQGKGGRTH LVSPVVAAAT AVMGRFASPS ELGVPVEVG
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