| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3621 |
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| Symbol | |
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| ID | 3904175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4323575 |
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| End bp | 4324972 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637880942 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_482702 |
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| Protein GI | 86742302 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.766514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCGCA CACTTGCGGA AAAGGTCTGG GACGCCCACG TGGTGCGGCG CGCCGACGGT
GAACCGGATC TGCTGTACAT CGATCTGCAC CTGGTTCACG AGGTCACCTC GCCGCAGGCG
TTCGAGGCCC TGCGGCTGGC CGGGCGGCCC GTGCGGCGTC CGGAGCTGAC CCTCGCTACC
GAGGATCACA ACGTCCCCAC CACCGACACG CTGGCGCCGA TCGCCGATCC GATCTCGGCG
GCCCAGGTGG AGGCGCTGCG GAAGAACTGC GCCGAGTTCG GCGTGCGGCT GTACCCGATG
AACGACCCGG GCCAGGGCAT CGTGCACGTC GTCGGCCCCC AGCTCGGGCT GTCCCAGCCC
GGCATGACGA TCGTCTGCGG TGACAGCCAC ACCTCCACCC ATGGCGCGTT CGGGGCGCTG
GCCTTCGGGA TCGGCACCAG CCAGGTCGAG CACGTCCTCG CGACCCAGAC GCTGCCGCAG
CGCAGGCCGA AGACGATGGC GATCACCGTG GCGGGCGACC TGCCCGTCGG GGTCAGCGCG
AAGGATCTCA TCCTGGCGAT CATTGCGCGG ATCGGTACCG GCGGTGGTGC CGGCCACGTC
ATCGAGTACC GCGGTGCGGC GATCCGGGCC CTGTCGATGG AGGGCCGGAT GACGGTCTGC
AACATGTCCA TCGAGGCCGG CGCGCGCGCC GGGATGATTG CGCCCGACGA CGTCACGTTC
GAGTATCTCG CCGGGCGGCC GCGTGTCGCC ACCGGTGCTG CCTGGGAGGA AGCGGTGGCC
TACTGGCGCA CCCTCGCCTC CGACTCCGAC GCGGTCTTCG ACCGGGAGGT CGTGATCGAT
GCCGCGAGCC TCACGCCCTA CGTCACCTGG GGAACCAACC CGGGCCAGGC CGCACCGCTC
GGATCGCTGG TTCCCGCGCC CGCCGACTAC CCGGACGCGG CCGCGCGGGC CTCGGTCGAA
CGAGCGCTGA CCTACATGGG CCTCACCCCC GGCACCCCGT TGTCCGACGT CACCGTCGAC
ACGGTGTTCA TCGGATCGTG CACCAACGGG CGCCTGAGTG ACCTGCGCGC CGCCGCCGAC
GTGCTGCGCG GCCGGCGGGT GAGCGAGGGG GTCCGGGTCC TGATCGTTCC CGGCTCCATG
GCGGTGAAGG CGCAGGCCGA GGCGGAGGGG CTCGACGAGG TCTTCCGAGC GGCGGGAGCG
CAGTGGCGCA GCGCCGGCTG TTCGATGTGC CTCGGCATGA ACCCCGACAC GCTTCGGCCC
GGCGAGCGCA GTGCCTCGAC GTCGAACCGC AACTTCGAGG GCCGGCAGGG GCCGGGTGGG
CGCACCCATC TCGTCTCGCC CGCGGTCGCC GCGGCCACCG CCGTGACCGG TCGGCTGACC
GCTCCGGCGG ATCTGTAG
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| Protein sequence | MGRTLAEKVW DAHVVRRADG EPDLLYIDLH LVHEVTSPQA FEALRLAGRP VRRPELTLAT
EDHNVPTTDT LAPIADPISA AQVEALRKNC AEFGVRLYPM NDPGQGIVHV VGPQLGLSQP
GMTIVCGDSH TSTHGAFGAL AFGIGTSQVE HVLATQTLPQ RRPKTMAITV AGDLPVGVSA
KDLILAIIAR IGTGGGAGHV IEYRGAAIRA LSMEGRMTVC NMSIEAGARA GMIAPDDVTF
EYLAGRPRVA TGAAWEEAVA YWRTLASDSD AVFDREVVID AASLTPYVTW GTNPGQAAPL
GSLVPAPADY PDAAARASVE RALTYMGLTP GTPLSDVTVD TVFIGSCTNG RLSDLRAAAD
VLRGRRVSEG VRVLIVPGSM AVKAQAEAEG LDEVFRAAGA QWRSAGCSMC LGMNPDTLRP
GERSASTSNR NFEGRQGPGG RTHLVSPAVA AATAVTGRLT APADL
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