| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001658 |
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| Symbol | |
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| ID | 8555287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 56268 |
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| End bp | 57668 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646404651 |
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| Product | 3-isopropylmalate dehydratase large subunit |
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| Protein accession | YP_003284286 |
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| Protein GI | 262392432 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAAAA CACTATACGA AAAAGTCTAC GACGCACACG TTGCCGTCGC AGCAGAAGGG
GAAAACCCTA TCTTGTACAT CGACCGTCAC TTGGTACATG AAGTGACCTC TCCACAAGCA
TTTGACGGCT TACGTGAAAA AGGTCGTAAA GTGCGTCAGG TCAGCAAAAC TTTTGCCACT
ATGGACCACA ACGTTTCGAC CACCACCAAA GACATTAACG CATCCGGTGA GATGGCTCGT
ATCCAGATGG AAACGCTATC GAAAAACTGT GAAGAGTTTG GCGTTACGCT TTACGACATC
AACCACAAAT ACCAAGGTAT TGTCCACGTC ATGGGCCCAG AGCTTGGTAT TACCCTACCG
GGTATGACGA TTGTTTGTGG TGACTCGCAC ACGGCTACAC ACGGTGCGTT CGGCTCTCTT
GCTTTTGGTA TTGGTACATC TGAAGTTGAG CACGTATTAG CAACTCAAAC GCTAAAACAA
GCGCGCGCTA AAACGATGAA GATCGAAGTG AAAGGCAAAG TGGCGCCGGG CATCACGGCG
AAAGACATCG TGCTAGCGAT CATCGGTGAG ACCACAGCTG CTGGCGGTAC AGGCTACGTG
GTTGAATTCT GTGGGGAAGC GATCACCGAC CTTTCAATGG AAGGTCGCAT GACCGTATGT
AACATGGCGA TTGAGCTAGG TGCGAAAGCC GGTTTGATTG CACCAGATGA AACCACATTC
GAATACATCA AAGGCCGTAA GTTCTCACCT CAAGGTGCGG ATTTTGATGC CGCTGTAGAA
TATTGGAAGA CATTAAAAAC TGACGATGAT GCCCAGTTTG ATGCGGTCGT GACACTAAAC
GCAACGGATA TCAAACCACA AGTCACTTGG GGTACTAACC CAGGCCAGGT TATCGCGGTA
GACCAACCGA TCCCAGCACC AGAAAGCTTT GCTGACCCAG TAGAAAAAGC ATCGGCAGAA
AAAGCTCTGG CTTACATGGG TCTAGAAGCA GGCAAGTCAT TGTCTGATTA CAACGTTGAT
AAAGTCTTCG TTGGCTCTTG TACTAACTCA CGTATCGAAG ACATGCGCGC AGCGGCGGAA
GTCGCGAAAG GTCGCAAAGT CGCGTCTCAC GTTCAAGCGC TTATCGTTCC TGGCTCTGAG
CAAGTAAAAG CGCAAGCGGA AGCAGAAGGC CTAGATGTCA TCTTTAAAGA GGCGGGCTTT
GAGTGGCGCC TACCAGGTTG CTCGATGTGT CTAGCAATGA ACAACGACCG TTTGGGTCCA
CATGAACGTT GTGCGTCTAC TTCAAACCGT AACTTTGAAG GCCGCCAAGG TCGTGATGGC
CGTACCCACC TAGTGAGCCC TGCGATGGCA GCGGCAGCAG CAATTGCTGG TCACTTTGTA
GATATTCGTG AACTAGACTA A
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| Protein sequence | MGKTLYEKVY DAHVAVAAEG ENPILYIDRH LVHEVTSPQA FDGLREKGRK VRQVSKTFAT
MDHNVSTTTK DINASGEMAR IQMETLSKNC EEFGVTLYDI NHKYQGIVHV MGPELGITLP
GMTIVCGDSH TATHGAFGSL AFGIGTSEVE HVLATQTLKQ ARAKTMKIEV KGKVAPGITA
KDIVLAIIGE TTAAGGTGYV VEFCGEAITD LSMEGRMTVC NMAIELGAKA GLIAPDETTF
EYIKGRKFSP QGADFDAAVE YWKTLKTDDD AQFDAVVTLN ATDIKPQVTW GTNPGQVIAV
DQPIPAPESF ADPVEKASAE KALAYMGLEA GKSLSDYNVD KVFVGSCTNS RIEDMRAAAE
VAKGRKVASH VQALIVPGSE QVKAQAEAEG LDVIFKEAGF EWRLPGCSMC LAMNNDRLGP
HERCASTSNR NFEGRQGRDG RTHLVSPAMA AAAAIAGHFV DIRELD
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