Gene CPS_4210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4210 
SymbolleuC 
ID3522067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4431203 
End bp4432618 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content43% 
IMG OID637286651 
Productisopropylmalate isomerase large subunit 
Protein accessionYP_270860 
Protein GI71281595 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR00170] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACTT CTACCCCGCA AACCATGTAT GAAAAATTAT GGCAAACCCA CTTAGTTGAA 
GCAACGAAGG GGGAAACACC ATTACTGTAT GTTGACCGTC ATCTAATTCA TGAAGTGACC
TCACCACAAG CTTTTGCAAA TTTACGTTTT CATAACCGCC CAGTTCGTCA TCCTGAACGT
ACTATTGCGA CCATGGATCA TAATATTTCA ACGCGTTCGA TTAAAATTGA TGCCGCTGGT
GAAGGCGCTG CCAACCAATT ACGCGCATTA GCAATAAACT GTAAAGACTT TGGTATCGAA
CTTTTTGACA TGGGTCATAA AAACCAGGGT ATAGCACATG TTATTGGGCC TGAACTAGGG
TTGACATTGC CAGGTACTAT TATTGTTTGT GGTGACTCAC ATACCGCTAC TCATGGCGCT
TTTGGTGCTC TTGCTTTTGG TATTGGTACC TCTGAAGTAG AACATGTTTT TGCAACGCAG
ACTTTACGTC AAAACAAAGC AAAAACAATG AAGATTGAAG TTAAAGGCCA TGTCGGTGCC
GGTATTAGTG CAAAAGATAT TATCTTAGCT ATTATCGGGA AAACCGGTAG TGCTGGTGCA
ACAGGTTATG TGGTTGAGTA CTGTGGCGAA GCTATCGAAG CGCTAAGTAT GGAAGAGCGC
ATGACGGTTT GTAACATGAG TATCGAATTT GGCGCAAAAG CAGGTTTAAT AGCACCGGAT
CAAACTACCT TTGATTATGT TGAAGGTAAA GAGTACGCAC CAAAAGGTGA AGTATTTGAA
CAAGCAGTTG TTGATTGGAA AAACCTAAAA TCTGATGCTG ATGCACAATT TGATGCGGTA
TTAACGTTAG ATGCCAAAGA CATTAAGGCG CAAGTTACTT GGGGTACAAA TCCAGGGCAA
GTTATCAGTG TCGACGGTAC TGTGCCTTCT CCAGAAGACT TTAGTGACCC GGTTGAAAAA
GAGTCTTGTG TTAGTGCGCT TAACTATATG GGCTTAACTG CAGGCACCAA GATGACTGAT
ATTCATGTGA ATAAGGTGTT TATTGGTTCT TGTACTAACT CACGTATTGA AGATTTACGT
GCCGCTGCCG GTGTTGTTCA AAAATATGAA GGTCAGCAAG TAGTCAAAAC TATTGATGCC
ATCATAGTTC CTGGTTCATA TCGCGTTAAA GAGCAGGCTG AAAGTGAAGG TTTAGACAAA
ATATTCACCG ATGCAGGTTT TGAATGGCGT TTACCTGGTT GCTCAATGTG TTTGGGCATG
AATGACGATG TCCTTGAAGA AGGTGACCGT TGTGCATCAA CCAGTAACCG TAACTTTGAA
GGTCGTCAAG GCCGTGGTAG TCGTACTCAC TTAGTTAGCC CTGAAATGGC AGCCGCTGCA
GCTATTACTG GTCACTTCGT TGATTTAAAC GCCTAA
 
Protein sequence
MTTSTPQTMY EKLWQTHLVE ATKGETPLLY VDRHLIHEVT SPQAFANLRF HNRPVRHPER 
TIATMDHNIS TRSIKIDAAG EGAANQLRAL AINCKDFGIE LFDMGHKNQG IAHVIGPELG
LTLPGTIIVC GDSHTATHGA FGALAFGIGT SEVEHVFATQ TLRQNKAKTM KIEVKGHVGA
GISAKDIILA IIGKTGSAGA TGYVVEYCGE AIEALSMEER MTVCNMSIEF GAKAGLIAPD
QTTFDYVEGK EYAPKGEVFE QAVVDWKNLK SDADAQFDAV LTLDAKDIKA QVTWGTNPGQ
VISVDGTVPS PEDFSDPVEK ESCVSALNYM GLTAGTKMTD IHVNKVFIGS CTNSRIEDLR
AAAGVVQKYE GQQVVKTIDA IIVPGSYRVK EQAESEGLDK IFTDAGFEWR LPGCSMCLGM
NDDVLEEGDR CASTSNRNFE GRQGRGSRTH LVSPEMAAAA AITGHFVDLN A