Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4210 |
Symbol | leuC |
ID | 3522067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4431203 |
End bp | 4432618 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637286651 |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_270860 |
Protein GI | 71281595 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACTT CTACCCCGCA AACCATGTAT GAAAAATTAT GGCAAACCCA CTTAGTTGAA GCAACGAAGG GGGAAACACC ATTACTGTAT GTTGACCGTC ATCTAATTCA TGAAGTGACC TCACCACAAG CTTTTGCAAA TTTACGTTTT CATAACCGCC CAGTTCGTCA TCCTGAACGT ACTATTGCGA CCATGGATCA TAATATTTCA ACGCGTTCGA TTAAAATTGA TGCCGCTGGT GAAGGCGCTG CCAACCAATT ACGCGCATTA GCAATAAACT GTAAAGACTT TGGTATCGAA CTTTTTGACA TGGGTCATAA AAACCAGGGT ATAGCACATG TTATTGGGCC TGAACTAGGG TTGACATTGC CAGGTACTAT TATTGTTTGT GGTGACTCAC ATACCGCTAC TCATGGCGCT TTTGGTGCTC TTGCTTTTGG TATTGGTACC TCTGAAGTAG AACATGTTTT TGCAACGCAG ACTTTACGTC AAAACAAAGC AAAAACAATG AAGATTGAAG TTAAAGGCCA TGTCGGTGCC GGTATTAGTG CAAAAGATAT TATCTTAGCT ATTATCGGGA AAACCGGTAG TGCTGGTGCA ACAGGTTATG TGGTTGAGTA CTGTGGCGAA GCTATCGAAG CGCTAAGTAT GGAAGAGCGC ATGACGGTTT GTAACATGAG TATCGAATTT GGCGCAAAAG CAGGTTTAAT AGCACCGGAT CAAACTACCT TTGATTATGT TGAAGGTAAA GAGTACGCAC CAAAAGGTGA AGTATTTGAA CAAGCAGTTG TTGATTGGAA AAACCTAAAA TCTGATGCTG ATGCACAATT TGATGCGGTA TTAACGTTAG ATGCCAAAGA CATTAAGGCG CAAGTTACTT GGGGTACAAA TCCAGGGCAA GTTATCAGTG TCGACGGTAC TGTGCCTTCT CCAGAAGACT TTAGTGACCC GGTTGAAAAA GAGTCTTGTG TTAGTGCGCT TAACTATATG GGCTTAACTG CAGGCACCAA GATGACTGAT ATTCATGTGA ATAAGGTGTT TATTGGTTCT TGTACTAACT CACGTATTGA AGATTTACGT GCCGCTGCCG GTGTTGTTCA AAAATATGAA GGTCAGCAAG TAGTCAAAAC TATTGATGCC ATCATAGTTC CTGGTTCATA TCGCGTTAAA GAGCAGGCTG AAAGTGAAGG TTTAGACAAA ATATTCACCG ATGCAGGTTT TGAATGGCGT TTACCTGGTT GCTCAATGTG TTTGGGCATG AATGACGATG TCCTTGAAGA AGGTGACCGT TGTGCATCAA CCAGTAACCG TAACTTTGAA GGTCGTCAAG GCCGTGGTAG TCGTACTCAC TTAGTTAGCC CTGAAATGGC AGCCGCTGCA GCTATTACTG GTCACTTCGT TGATTTAAAC GCCTAA
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Protein sequence | MTTSTPQTMY EKLWQTHLVE ATKGETPLLY VDRHLIHEVT SPQAFANLRF HNRPVRHPER TIATMDHNIS TRSIKIDAAG EGAANQLRAL AINCKDFGIE LFDMGHKNQG IAHVIGPELG LTLPGTIIVC GDSHTATHGA FGALAFGIGT SEVEHVFATQ TLRQNKAKTM KIEVKGHVGA GISAKDIILA IIGKTGSAGA TGYVVEYCGE AIEALSMEER MTVCNMSIEF GAKAGLIAPD QTTFDYVEGK EYAPKGEVFE QAVVDWKNLK SDADAQFDAV LTLDAKDIKA QVTWGTNPGQ VISVDGTVPS PEDFSDPVEK ESCVSALNYM GLTAGTKMTD IHVNKVFIGS CTNSRIEDLR AAAGVVQKYE GQQVVKTIDA IIVPGSYRVK EQAESEGLDK IFTDAGFEWR LPGCSMCLGM NDDVLEEGDR CASTSNRNFE GRQGRGSRTH LVSPEMAAAA AITGHFVDLN A
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