Gene Aaci_2225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2225 
Symbol 
ID8425753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2282698 
End bp2284113 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content66% 
IMG OID645028345 
Product3-isopropylmalate dehydratase, large subunit 
Protein accessionYP_003185623 
Protein GI258512189 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR00170] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.918253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGAGGA CCCTGTTCGA AAAAGTCTGG GACGCGCACG TGGTCAAGGA ACTGCCGGAT 
GGACAGACGC TTCTCTACAT TGACTTGCAC CTCGTCCACG AGGTGACGTC GCCTCAGGCG
TTTGCCGGAC TTCGTTTCGC GGGGCGCAAG GTTCGCCGGC CCGAGCTGAC GTTTGCGACC
ATGGATCACA ACGTGCCGAC GGTCAATCCG AAGGATGTCC GGGACGCCAT TGCGCGCAAG
CAGATCGAGA CGCTGGAGCA GAACTGCCGC GAGTTCGGCG TCCAACTGGC GGGGCTCGAC
AGCCCCTTCC AGGGCATTGT GCATGTCATC GGCCCGGAGC TTGGGCTGAC CATGCCGGGG
AAGACGATTG TCTGCGGCGA CAGCCACACG TCGACGCACG GCGCGTTCGG CGCGCTCGCC
TTTGGCATCG GCACGAGCGA GGTGGAACAC GTTCTCGCCA CGCAGTGCCT CTGGCAGAGC
CGACCGAAGA CCATGCGCAT TCAGCTGAAT GGCACGCTTC AACCGGGCGT CACCGCCAAG
GACGTGATCT TGGGCCTGAT TGCGAAATAC GGCGTGAATT TTGGCACGGG CCACGTCGTG
GAGTACGCGG GCAGCCTGAT CCCAGAGCTC AGCATGGAGC AGCGGATGAC CATCTGCAAC
ATGTCCATCG AGTTCGGCGC CCGGGCGGGC ATGATGGCGC CGGACGAGAC GACCATCGCC
TACGTCCAGG GCCGGCGCTA TGCGCCGAAG GGCGCGGATT GGGAGGCGTG CGTCGCCGCA
TGGCGCGAAC TGAAGTCCGA TCCCGACGCC GTCTTCGACG TCGACGTGGT CTTCGATGTG
AATGACCTCG AGCCGCAGGT GACGTGGGGC ACCAATCCGG GGCAGGGGAC CGGCATCAGC
GGCGTCGTGC CGGATCCGAA GGACGCGAAG TCCGAGGAGG AGGCGCTGGC CATTCGACAG
GCGCTTGAGT ACATGGACCT GAAGCCGGGA ACCAAAATCT CCGAGATCCC CATCCAGCAC
GTGTTCATCG GATCGTGCAC CAACGCCCGC ATCGAGGATC TGCGCTTGGC CGCGAGCATC
GTCAAGGGCC GGCGCGTCGC GGATGGCGTG CGCGCGGTGG TCGTGCCGGG ATCGAAACAG
GTGAAGCAGC AGGCGGAGGC CGAGGGGCTT CACGAGATCT TCCTCGAAGC GGGCTTCGAG
TGGCGCGAGC CCGGCTGCAG CGCGTGTCTC GGCATGAATC CCGACATCAT CCCGGCTGGG
GAGCGGTGCG CATCGACGTC CAACCGCAAC TTCGAAGGCC GGCAGGGCAA AGGGGCCCGC
ACGCACCTCG TCAGCCCGGC CATGGCGGCC GCCGCGGCCA TCGCGGGGCA CTTCGTCGAC
GTGCGCGAAC TGACCTCGGA AGGAGTGACG GCGTGA
 
Protein sequence
MGRTLFEKVW DAHVVKELPD GQTLLYIDLH LVHEVTSPQA FAGLRFAGRK VRRPELTFAT 
MDHNVPTVNP KDVRDAIARK QIETLEQNCR EFGVQLAGLD SPFQGIVHVI GPELGLTMPG
KTIVCGDSHT STHGAFGALA FGIGTSEVEH VLATQCLWQS RPKTMRIQLN GTLQPGVTAK
DVILGLIAKY GVNFGTGHVV EYAGSLIPEL SMEQRMTICN MSIEFGARAG MMAPDETTIA
YVQGRRYAPK GADWEACVAA WRELKSDPDA VFDVDVVFDV NDLEPQVTWG TNPGQGTGIS
GVVPDPKDAK SEEEALAIRQ ALEYMDLKPG TKISEIPIQH VFIGSCTNAR IEDLRLAASI
VKGRRVADGV RAVVVPGSKQ VKQQAEAEGL HEIFLEAGFE WREPGCSACL GMNPDIIPAG
ERCASTSNRN FEGRQGKGAR THLVSPAMAA AAAIAGHFVD VRELTSEGVT A