Gene Bfae_18560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_18560 
Symbol 
ID8400402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp2076700 
End bp2078139 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content71% 
IMG OID644997919 
Product3-isopropylmalate dehydratase, large subunit 
Protein accessionYP_003155265 
Protein GI257069010 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR00170] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.242112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGGA CTCTCGCGGA GAAGGTCTGG GCGGATCACG TGGTCCGTCG CGGTGAGAAC 
GGCGAGCCGG ACCTTCTGTA CATCGATCTC CAGCTGCTCC ACGAGGTGAC CAGCCCGCAG
GCCTTCGACG GGCTGCGGCA GGAGGGCCGC GCGCCGCGCC GCATCGACCA GACGATCGCG
ACGGAGGATC ACAACACCCC CACGATCGAC ATCGACAAGC CGATCGCGGA CATCACCTCC
CGCACCCAGA TCGAGACCCT GCGCCGCAAC GCCGAGGAGT TCGGCGTGCG CATCCACCCG
CTGGGCGACA AGGAGCAGGG CATCGTCCAC GTCGTGGGCC CGCAGCTGGG GCTGACGATG
CCGGGCATCA CCGTGGTCTG CGGCGACTCC CACACCTCGA CCCACGGTGC CTTCGGCGCG
CTCGCCTTCG GCATCGGCAC CAGCGAGGTC GAGCACGTGC TGGCCACGCA GACCCTCCCG
CTGACCCCCT TCAAGACCAT GGCGGTCACC GTCACCGGCT CGCTCAAGCC GGGCGTGACC
GCGAAGGACA TCATCCTCGC CGTCATCGCG AAGATCGGCA CCGGCGGCGG TGCGGGCTAT
GTGCTCGAGT ACCGCGGCGA GGCGATCCGC TCCCTGTCCA TGGAGGGGCG GATGACGATC
TGCAACATGT CGATCGAAGC CGGCGCCCGC GCCGGCATGA TCGCCCCGGA CGAGACCACC
TTCGAGTACG TCAAGGGCCG GCCGCACGCC CCGCAGGGCG CGGACTGGGA CGAGGCCGTC
GAGTACTGGA AGACGCTGCG CACGGACGAC GACGCGACCT TCGACGCCGA GGTCGTCATC
GACGCCGATG AGCTCGAGCC CTTCGTCACC TGGGGCACCA ACCCTGGCCA GGGGCTGCCG
CTGTCCGCCG AGGTCCCCGC GCCCGAGGAC TTCGTCGACG AGACCGACCG CTACGCCGCC
GAGCGGGCGC TGGAGTACAT GGACCTCGTC CCCGGCATGC CGCTGAAGGA CATCAAGGTC
GACACCGTCT TCATGGGCTC GTGCACCAAC GGCCGCATCG AGGACCTGCG CGCCTTCGCC
TCCGTGCTGG AGGGGCGCAC CAAGCACCCT GACGTGCGCG TCCTGGTGGT GCCGGGCTCG
GCACGGGTGC GCCTGCAGGC CGAGCAGGAG GGTCTCGACG AGATCTTCCT CGCCTTCGGC
GCCGAGTGGC GCCAGGCGGG CTGCTCGATG TGCCTGGGCA TGAACCCCGA TCAGCTCGCC
CCGGGCGAGC GCGCCGCCTC GACCTCCAAC CGCAACTTCG AGGGCCGGCA GGGCAAGGGC
GGGCGCACCC ACCTGGTCTC GCCCGTCGTG GCCGCCGCGA CCGCCGTGCG CGGCACCCTG
TCCTCCCCGT CGGACCTCGG CGCCCCCGTC GCGCCCTCCG ACCTCCAGCC CGTCGCCTGA
 
Protein sequence
MAGTLAEKVW ADHVVRRGEN GEPDLLYIDL QLLHEVTSPQ AFDGLRQEGR APRRIDQTIA 
TEDHNTPTID IDKPIADITS RTQIETLRRN AEEFGVRIHP LGDKEQGIVH VVGPQLGLTM
PGITVVCGDS HTSTHGAFGA LAFGIGTSEV EHVLATQTLP LTPFKTMAVT VTGSLKPGVT
AKDIILAVIA KIGTGGGAGY VLEYRGEAIR SLSMEGRMTI CNMSIEAGAR AGMIAPDETT
FEYVKGRPHA PQGADWDEAV EYWKTLRTDD DATFDAEVVI DADELEPFVT WGTNPGQGLP
LSAEVPAPED FVDETDRYAA ERALEYMDLV PGMPLKDIKV DTVFMGSCTN GRIEDLRAFA
SVLEGRTKHP DVRVLVVPGS ARVRLQAEQE GLDEIFLAFG AEWRQAGCSM CLGMNPDQLA
PGERAASTSN RNFEGRQGKG GRTHLVSPVV AAATAVRGTL SSPSDLGAPV APSDLQPVA