Gene SERP1671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1671 
SymbolleuC 
ID3240620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1710379 
End bp1711749 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content36% 
IMG OID637168352 
Productisopropylmalate isomerase large subunit 
Protein accessionYP_189236 
Protein GI57867572 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR00170] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCAAA CACTGTTTGA TAAAGTATGG AAAAAACATG TGCTTCATGG AAAAGAAGGT 
GAACCACAAT TATTATACAT TGATTTACAT CTCATTCATG AAGTCACTTC TCCTCAAGCG
TTTGAAGGAC TTAGAATACA AAATCGTAAA CTCAGAAGAC CTGATCTAAC CTTTGCAACT
TTAGATCATA ACGTTCCCAC AATTGATATT TTTAATATAA AAGATGAAAT TGCTAATAAA
CAAATTACAA CTTTACAACA AAATGCTAAG GACTTTGGTG TACATATTTT TGATATGGGT
TCTGACGAAC AAGGTATTGT GCATATGGTT GGACCAGAAA CCGGATTAAC TCAACCAGGA
AAAACTATTG TATGTGGAGA TTCACATACT GCTACACATG GCGCATTTGG TGCTATCGCA
TTTGGGATAG GAACAAGCGA GGTTGAACAT GTATTTGCCA CACAAACATT ATGGCAAACA
AAACCTAAAA ATTTGAAAAT TAATATAAAT GGTTCTTTAC CAGCTGGAGT TTATGCTAAA
GACATTATTT TATATTTAAT CAATCAATAT GGTGTAGATT TCGGTACTGG TTATGCTCTT
GAATTTACAG GAGAAACTAT AAAAAATTTA TCCATGGAAG CACGTATGAC GATTTGTAAT
ATGGCTATTG AAGCAGGAGC AAAGTATGGT TTAATGCAAC CTGATGAAAC AACCTTTAAT
TACGTAAAAG GTCGTCCTTA TGCTACTGAT TTTGATAGTT CTATGGCGTG GTGGAAAGAA
CTTTATTCTG ATGATGATGC CTATTTTGAT AAAGTTATTG AACTTGATGT AACAAATTTA
GAACCTCAAG TAACTTGGGG AACTAACCCA GAAATGGGAG TTAGTTTTAG TAATCCATTC
CCAGAAATTA AAAATGCAAA TGACCAACGT GCTTATGACT ATATGGGACT TCACCCAGGT
CAAAAAGCCG AAGATATAAA ATTAGGTTAT GTTTTTTTAG GTTCATGCAC GAATGCAAGA
TTATCTGATC TTATTGAAGC AAGTCATATT ATTAAAGGAC AACAAGTTCA TCCAAATATT
ACTGCTATTG TGGTTCCGGG TTCAAGAACT GTTAAGAAGG AAGCTGAAGC TCTGGGACTA
GATAAATTAT TTAAAGATGC TGGATTTGAG TGGCGTGAAC CAGGATGTTC TATGTGCTTA
GGTATGAATC CAGATCAAGT TCCTGAAGGA GTACATTGTG CATCCACGAG TAATCGCAAT
TTTGAAGGAA GACAAGGCAA AGGCGCTCGT ACACATTTGG TATCCCCTGC TATGGCTGCT
GCTGCTGCGA TTAATGGTAA ATTCATTGAT GTTAGAAAGG TGGTAGTATA A
 
Protein sequence
MGQTLFDKVW KKHVLHGKEG EPQLLYIDLH LIHEVTSPQA FEGLRIQNRK LRRPDLTFAT 
LDHNVPTIDI FNIKDEIANK QITTLQQNAK DFGVHIFDMG SDEQGIVHMV GPETGLTQPG
KTIVCGDSHT ATHGAFGAIA FGIGTSEVEH VFATQTLWQT KPKNLKININ GSLPAGVYAK
DIILYLINQY GVDFGTGYAL EFTGETIKNL SMEARMTICN MAIEAGAKYG LMQPDETTFN
YVKGRPYATD FDSSMAWWKE LYSDDDAYFD KVIELDVTNL EPQVTWGTNP EMGVSFSNPF
PEIKNANDQR AYDYMGLHPG QKAEDIKLGY VFLGSCTNAR LSDLIEASHI IKGQQVHPNI
TAIVVPGSRT VKKEAEALGL DKLFKDAGFE WREPGCSMCL GMNPDQVPEG VHCASTSNRN
FEGRQGKGAR THLVSPAMAA AAAINGKFID VRKVVV