Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3826 |
Symbol | |
ID | 5664210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4650938 |
End bp | 4652338 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641238490 |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_001503671 |
Protein GI | 157963637 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAGA CACTATATGA GAAAGTATGG GACAGCCATG TGGTTGTCGC CCCTGAAGGC GAAGCGCCCA TTATCTATGT TGATAGGCAT CTAGTGCATG AGGTGACCTC ACCCCAAGCA TTTAGTGGAG TTAAGGTCGC TGGCCGACAG TTACGTGCGC CACAGAAAAC CTTCGCCACC ATGGATCACA ACACATCCAC AACCAGCGCA AGCTTAGATG CACTTAGCCC TATGGCGCGT ACTCAGGTTG AAACTCTAGA GCAAAACTGT AAAGAGTTCG GCGTTCGCCT CTATGATATT CACCATAAGA ATCAAGGTAT TGTGCATGTG ATGGGCCCAG AGCTTGGCAT TACTTTGCCG GGAACTGTGA TTGTGTGTGG TGACTCGCAT ACCGCCACCC ATGGCGCCTT TGGTGCTCTT GCATTTGGTA TCGGTACATC GGAAGTTGAG CATGTGATGG CGACGCAGAC ACTACGTCAG CTAAAGGCCA AGACCATGAA GATTGAAGTT CGTGGTCATG TGGCTTCTGG GATCACCGCT AAAGATATCG TGTTAGCGAT TATTGGTAAA ATTGGCATGG ATGGCGGCAC AGGTTATGTG GTTGAGTTCT GTGGTGAAGC AATCGAGGCG CTGAGCATGG AAGGCCGCAT GACAGTATGC AATATGGCCA TCGAGATGGG CGCAAAGGCA GGCATGATAG CCCCAGATGC GACGACGGCT GAATACCTTG AAGGTCGTGA GTTTTCACCA AAAGGTGAAA GCTGGAGCCA AGCCGTTGCT GCTTGGGAGC AGTTAAAAAC CGACGAAGGT GCAGTATTTG ATGCCAGTGT GGTGTTAGAT GCCATAGATA TTGCACCGCA ACTGACTTGG GGAACCAACC CAGGCCAGGT GGTTGCTATC GATCAGTTAG TGCCAAACCC ACTCGATGCC ACCAACTCTA CCGTTCGTAG TAGTATCGAG AAGGCGCTGG AGTATGTCGA TTTAACAGCG GGCACCTTGA TGACAGATGT CAGTATCAAT AAAGTATTTA TTGGTTCTTG TACTAACTCT CGCATTGAGG ATCTTCGCGC CGCAGCGGTT CACGCCAAGG GGCGCAAGGT CGCTGATGGG GTAAAGGCTA TTGTTGTACC AGGCTCAGGG CTAGTTAAAG AGCAAGCCGA GGCTGAAGGT TTAGATAAGA TCTTTACTGA TGCCGGTTTT GAATGGCGCT TACCGGGTTG CTCTATGTGT TTAGCTATGA ATGACGATAA ATTGGAAGCG GGCGATCGCT GCGCGTCGAC TAGTAATCGT AATTTTGAGG GCCGACAAGG GCGTGGCAGC CGTACTCACT TAGTGAGCCC TGCTATGGCC GCCGCTGCTG CGGTAGCCGG ACACTTTGTT GATATTCGCA AACCATACTA G
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Protein sequence | MAKTLYEKVW DSHVVVAPEG EAPIIYVDRH LVHEVTSPQA FSGVKVAGRQ LRAPQKTFAT MDHNTSTTSA SLDALSPMAR TQVETLEQNC KEFGVRLYDI HHKNQGIVHV MGPELGITLP GTVIVCGDSH TATHGAFGAL AFGIGTSEVE HVMATQTLRQ LKAKTMKIEV RGHVASGITA KDIVLAIIGK IGMDGGTGYV VEFCGEAIEA LSMEGRMTVC NMAIEMGAKA GMIAPDATTA EYLEGREFSP KGESWSQAVA AWEQLKTDEG AVFDASVVLD AIDIAPQLTW GTNPGQVVAI DQLVPNPLDA TNSTVRSSIE KALEYVDLTA GTLMTDVSIN KVFIGSCTNS RIEDLRAAAV HAKGRKVADG VKAIVVPGSG LVKEQAEAEG LDKIFTDAGF EWRLPGCSMC LAMNDDKLEA GDRCASTSNR NFEGRQGRGS RTHLVSPAMA AAAAVAGHFV DIRKPY
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