| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8018 |
|---|
| Symbol | |
|---|
| ID | 8671343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 8828354 |
|---|
| End bp | 8829733 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | 3-isopropylmalate dehydratase, large subunit |
|---|
| Protein accession | YP_003343416 |
|---|
| Protein GI | 271969220 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGCA CGCTGGCGGA GAAGGTCTGG GAGCAGCACG TCGTGCGACG TGCCGATGGA
GAACCTGATC TGCTCTACAT CGACCTTCAC CTCATTCACG AGGTGACCAG CCCGCAGGCG
TTCGACGGCC TGCGCATGGC GGGACGCCCC GTCCGGCGAC CCGAACTCAC GATCGCCACC
GAGGACCACA ACGTCCCGAC CCTGCTCGGT CCGATCAAGG ACCCGGTGTC GCGCACCCAG
GTCGAGACGC TGCGCAAGAA CTGCGCCGAG TTCGGCATCC GGCTGCACCC GATGGGTGAC
GCGGGCCAGG GCGTCGTGCA CATCATCGGG CCGCAGTTCG GCCTCACCCA GCCGGGCATG
ACGATCGTCT GTGGCGATTC TCACACCTCC ACCCACGGCG CCTTCGGCGG CATCGCCTTC
GGCATCGGCA CCTCCGAGGT GGAGCACGTG CTGGCCACCC AGACGCTGCC CGCCTACCGG
CCCAAGACGA TGGCCATCGA GGTCTCCGGC GAGCTGCCGG CCGGCGTCAC GGCCAAGGAC
CTGATCCTGG CGATCATCGC CAAGATCGGC ACCGGCGGCG GCCAGGGCTA CATCGTCGAA
TACCGCGGCG AGGCCATCCG CAAGCTCTCC ATGGAGGGCC GGATGACCGT CTGCAACATG
TCCATCGAGG CGGGCGCCCG GGCGGGCCTG ATCGCTCCGG ACGAGACCAC GTTCGACTAC
CTCAAGGGCC GCCCCCACGC GCCGGCCGGC GCCGACTGGG ACGCCGCGGT CGAATACTGG
AAGTCCCTGA CGACCGACGA GGACGCCGTC TTCGACACGG TCGTGGAGAT CGACGCCACG
ACGCTGACCC CGTTCGTCAC CTGGGGCACG AACCCGGGCC AGGGTGCTCC GCTGGGGTCG
GCGGTGCCGG CCCCGCAGGA CACCGACGAC CCGGCCGCGG CCGAGCGCGC GCTGGAGTAC
ATGGGCCTGA CCGCGGGCAC CCCGCTCCGC GACGTCGCGG TGGACACGGT CTTCGTCGGC
TCCTGCACCA ACGGGCGGCT GGAGGACCTG CGGGCCGTGG CCGAGGTGCT GCGCGGCCGC
CAGGTCGTCA CCCGCACGCT CATCGTCCCG GGCTCGATGC TGGTCAAGCT CCAGGCCGAG
CAGGAGGGGC TGCACGAGGT TTTCAAGGCG GCGGGCGCCG AGTGGCGCGA GGCGGGCTGC
TCGATGTGCC TGGGCATGAA CCCCGACACG CTCGCCCCCG GCGAGCGCAG CGCGTCGACC
TCCAACCGCA ACTTCGAGGG ACGCCAGGGC AAGGGCGGCC GTACCCACCT GGTCTCCCCT
CAGGTCGCCG CCGCGACCGC CGTCACCGGC AAGCTGACCG CGCCCGCCGA CCTGGTCTAG
|
|---|
| Protein sequence | MGRTLAEKVW EQHVVRRADG EPDLLYIDLH LIHEVTSPQA FDGLRMAGRP VRRPELTIAT
EDHNVPTLLG PIKDPVSRTQ VETLRKNCAE FGIRLHPMGD AGQGVVHIIG PQFGLTQPGM
TIVCGDSHTS THGAFGGIAF GIGTSEVEHV LATQTLPAYR PKTMAIEVSG ELPAGVTAKD
LILAIIAKIG TGGGQGYIVE YRGEAIRKLS MEGRMTVCNM SIEAGARAGL IAPDETTFDY
LKGRPHAPAG ADWDAAVEYW KSLTTDEDAV FDTVVEIDAT TLTPFVTWGT NPGQGAPLGS
AVPAPQDTDD PAAAERALEY MGLTAGTPLR DVAVDTVFVG SCTNGRLEDL RAVAEVLRGR
QVVTRTLIVP GSMLVKLQAE QEGLHEVFKA AGAEWREAGC SMCLGMNPDT LAPGERSAST
SNRNFEGRQG KGGRTHLVSP QVAAATAVTG KLTAPADLV
|
|---|
| |