| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1258 |
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| Symbol | |
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| ID | 5057711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1420210 |
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| End bp | 1421655 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640473530 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_001158106 |
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| Protein GI | 145593809 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.55744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.382246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGGAG TCACTCCTGA GCCGAGGACC CTGGCCGAGA AGGTCTGGGC CTCGCACGTC
GTCCGATCCG CCGATGGCGA GCCCGACCTG CTCTTCATCG ACCTGCACCT GCTCCATGAG
GTGACCAGCC CGCAAGCCTT CGACGGGCTG CGCCTCGCCG GCCGCCGGGT CCGCCGTACC
GACCTGACGA TCGCGACCGA GGACCACAAC ACCCCCACCG GGTACGCGGA CCCGTCGTAC
CAGTCTCGCC GCGGGGACCT GCTGACCATC ACCGACCCGA CCTCTCGTAC ACAGATCGAG
ACGCTGCGCC GCAACTGCGC CGAGTTCGGT GTGCGGCTGC ATCCGCTGGG TGATGAGAAC
CAGGGAATCG TCCACGTCAT CGGCCCGCAG CTGGGCCTGA CCCAGCCCGG GATGACGATC
GTCTGCGGCG ACTCGCACAC CGCGACGCAT GGGGCCTTCG GCGCGCTGGC CTTCGGGATC
GGCACCAGCG AGGTCGAGCA CGTGCTCGCC ACCCAGACGC TGCCGCAGGC CCGACCGAGG
ACGATGGCGG TGAACGTCGT CGGTGACCTC GCACCGGGCG TTACCGCCAA GGACCTGGTA
CTCGCGCTGA TCGCCCAGGT CGGTACGGGT GGTGGTCGGG GGCATGTCGT GGAGTATCGC
GGCGAGGCGA TCCGGAAGCT GTCCATGGAG GGACGGATGA CGATCGCCAA CATGTCCATC
GAGTGGGGTG CCAAGGCGGG GTTGATCGCC CCTGACGACA CGACGTTCGG CTACCTCAGG
GGGCGGCCGA ACGCGCCCGC CGGTGCCGAC TGGGAAGCGG CGGTCGCGTA CTGGCGGACG
CTGCCCACCG ACGCGGGCGC AACGTTCGAC TCCGAGGTGA CCCTGGATGC GAGCCAGATC
ACGCCCTTCG TGACCTGGGG TACCAACCCG GGGCAGGGCG CGTCGCTGGA CGCGTCGGTG
CCGAACCCGG AGGAGTTCGC CACCGAGCCG GAGCGGGCCG CCGCCCGCCG TGCCCTGGAG
TACATGGACC TCGCCGTGGG CACTCCGCTG CGGGAGCTCA CCGTTGACGT CGTCTTCGTC
GGCTCCTGCA CCAACGGCCG GATTGAGGAC CTGCGGGCGG CTGCCGACGT ACTGCGCGGG
CGCCGGGTGG CGCCGGGTGT GCGGATGCTC GTCGTGCCGG GCTCCGCCGC GGTGCGGGAG
AACGCCGAGG CGGAAGGGCT GGACAAGGTC TTCACCGAAG CCGGCGCCGA GTGGCGCTTC
GCGGGTTGCT CGATGTGTCT GGGAATGAAC CCGGACACGC TCCGGCCGGG CCAGCGTGCC
GCCTCGACCT CGAACCGTAA CTTCGAGGGC CGCCAGGGCC GGGGGGGACG TACCCACCTG
GTCTCCCCAC CAGTCGCTGC GGCCACCGCG GTGACGGGCC GGCTGGCGGC CCCCGCCGAC
CTGTGA
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| Protein sequence | MVGVTPEPRT LAEKVWASHV VRSADGEPDL LFIDLHLLHE VTSPQAFDGL RLAGRRVRRT
DLTIATEDHN TPTGYADPSY QSRRGDLLTI TDPTSRTQIE TLRRNCAEFG VRLHPLGDEN
QGIVHVIGPQ LGLTQPGMTI VCGDSHTATH GAFGALAFGI GTSEVEHVLA TQTLPQARPR
TMAVNVVGDL APGVTAKDLV LALIAQVGTG GGRGHVVEYR GEAIRKLSME GRMTIANMSI
EWGAKAGLIA PDDTTFGYLR GRPNAPAGAD WEAAVAYWRT LPTDAGATFD SEVTLDASQI
TPFVTWGTNP GQGASLDASV PNPEEFATEP ERAAARRALE YMDLAVGTPL RELTVDVVFV
GSCTNGRIED LRAAADVLRG RRVAPGVRML VVPGSAAVRE NAEAEGLDKV FTEAGAEWRF
AGCSMCLGMN PDTLRPGQRA ASTSNRNFEG RQGRGGRTHL VSPPVAAATA VTGRLAAPAD
L
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