| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1113 |
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| Symbol | |
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| ID | 5669526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1330711 |
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| End bp | 1332108 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641240045 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_001505473 |
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| Protein GI | 158312965 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.681996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.828695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCGCA CACTCGCGGA GAAGGTCTGG GACGCACACG TCGTCCGCCG CGCGGACGGA
GAGCCCGACC TGCTCTACAT CGATCTGCAC CTCGTCCACG AGGTCACCTC GCCGCAGGCG
TTCGAGGCGC TGCGGCTGGC CGGGCGCCCG GTCCGCCGTC CCGACCTGAC GCTGGCGACC
GAGGACCACA ACGTCCCGAC GACCGACACG CTGCTGCCGA TCGCCGACCC GGTCTCGCGG
GCGCAGGTCG AGGCGCTGCG CAAGAACTGC GCCGACTTCG GGGTCCGCCT GTTCCCGATG
AACGACCCGG ACCAGGGCAT CGTCCACGTG GTCGGCCCGC AGCTCGGCCT GTCCGAGCCG
GGCATGACGA TCGTCTGTGG CGACAGCCAC ACCTCGACGC ACGGCGCCTT CGGGGCGCTC
GCCTTCGGCA TCGGCACCAG CCAGGTCGAG CATGTGCTGG CCACCCAGAC GCTGCCGCAG
CGCCGCCCGA AGACGATGGC GGTCACCGTC CAGGGTGAGC TGCCCGCCGG GGTCACCGCG
AAGGACCTGA TCCTCGCCGT GATCGCCCGG ATCGGCACGG GTGGCGGCGC CGGCTACGTC
ATCGAGTACC GCGGCGAAGC CGTCCGCGGG CTGTCGATGG AGGGCCGGAT GACGGTCTGC
AACATGTCGA TCGAGGCGGG CGCGCGCGCC GGGATGATCG CCCCGGACGA GACCACGTTC
GAGTACCTCA GGGGACGTCC GAACGCCCCG ACCGGGGCCG ACTGGGACGC CGCGGTCGAG
TACTGGCGCA CCCTGGCCAC CGACCCCGAC GCCACGTTCG ACCACGAGGT CGTCATCGAC
GGGCCCAGCC TGAGCCCGTA CGTCACCTGG GGGACCAACC CGGGCCAGGC TGCGCCGCTG
AGCTCGCCCG TGCCCGACCC GGCCGCCTAT GCCGACCCGG CCGCGCGCGG CTCGGTGGAA
CGCGCCCTGG CCTACATGGA TCTCGTGCCG GGCACCCCGC TGTCCGACGT CGCCGTCGAC
ACCGTCTTCA TCGGATCCTG CACCAACGGC CGGATCTCCG ACCTGCGTGA CGCCGCCGAC
GTGCTGCGCG GGCGCCAGGT GGCGGACGGC CTTCGGGTCC TGGTCGTCCC CGGCTCGATG
GCGGTCAAGG CCGAGGCGGA GGCGGAGGGC CTCGACGAGG TGTTCCGCGC CGCGGGCGCC
GACTGGCGTA GCGCCGGCTG CTCGATGTGC CTGGGCATGA ACCCGGACAC CCTGCGGCCG
GGGGAGCGCA GCGCGTCGAC GTCCAACCGC AACTTCGAGG GCCGGCAGGG CCCCGGCGGG
CGAACCCACC TCGTCTCGCC GGCGGTCGCC GCCGCCACCG CGGTGACCGG CCGCCTCACG
GCGCCCGCCG ACCTGTAG
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| Protein sequence | MGRTLAEKVW DAHVVRRADG EPDLLYIDLH LVHEVTSPQA FEALRLAGRP VRRPDLTLAT
EDHNVPTTDT LLPIADPVSR AQVEALRKNC ADFGVRLFPM NDPDQGIVHV VGPQLGLSEP
GMTIVCGDSH TSTHGAFGAL AFGIGTSQVE HVLATQTLPQ RRPKTMAVTV QGELPAGVTA
KDLILAVIAR IGTGGGAGYV IEYRGEAVRG LSMEGRMTVC NMSIEAGARA GMIAPDETTF
EYLRGRPNAP TGADWDAAVE YWRTLATDPD ATFDHEVVID GPSLSPYVTW GTNPGQAAPL
SSPVPDPAAY ADPAARGSVE RALAYMDLVP GTPLSDVAVD TVFIGSCTNG RISDLRDAAD
VLRGRQVADG LRVLVVPGSM AVKAEAEAEG LDEVFRAAGA DWRSAGCSMC LGMNPDTLRP
GERSASTSNR NFEGRQGPGG RTHLVSPAVA AATAVTGRLT APADL
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