| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0626 |
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| Symbol | |
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| ID | 3580658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 728838 |
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| End bp | 730235 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637684319 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_288687 |
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| Protein GI | 72161030 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGCA CGATGGCCGA AAAAGTCTGG GAGGAGCACG TCGTCAGGCG AGCCGAGGGT
GAACCCGACC TGCTCTACAT CGACCTGCAC CTCATCCACG AGGTGACCAG CCCTCAGGCG
TTCGAAGGGC TCCGCCTGGC CAACCGGAAG CTGCGCCGCC CGGACCTCAC CATCGCCACC
GAGGACCACA ACGTCCCCAC CGAGAACATC TTCCTGCCGA TCGCTGACCC GGTGTCGCGC
ACCCAGGTCG AAACCCTGCG CAAGAACGCC GCGGAGTTCG GGGTGCGCCT CCACCCGATG
GGCGACATCG ACCAGGGCAT CGTGCACGTC ATCGGCCCGC AGCTGGGCCT CACCCAGCCG
GGGATGACCA TCGTCTGCGG CGACAGCCAC ACCAGCACGC ACGGCGCGTT CGGCGCGCTG
GCCTTCGGCA TCGGTACCAG CCAGGTCGAG CACGTCATGG CCACCCAGAC GCTGCCGATG
ACGCCGTTCA AGACCATGGC GGTCAACGTC GAGGGCAAGC TCAAGCCGGG GGTGACCGCC
AAGGACATCA TCCTCGCCGT GATCGCTCAG ATCGGCACCG GCGGCGGCCA GGGCCACGTG
ATCGAGTACC GGGGCGAGGC CATCCGGTCG CTGTCCATGG AAGCCCGCAT GACCATCTGC
AACATGTCGA TCGAGGCGGG CGCCCGGGCC GGCATGATCG CCCCCGACCA GACCACTTTC
GACTACCTCA AGGGCCGTCC GCACGCCCCC AAGGGCGAAC TGTGGGACCA GGCCGTCGAA
TACTGGAAGA CCCTGCCCAC CGACGAAGGC GCAGTGTTCG ACAAGGAGGT CTTCCTCAAC
GCCGACGAGC TCAGCCCGTT CGTCACCTGG GGCACCAACC CCGGACAGGG CGTCCCCCTG
GACTCGGTCG TCCCCGACCC CGAGTCCTTC ACCGACCCGG TCGAGCGTGC CGCCGCCGAG
AAGGCCCTGG CCTACATGGA CCTGAAGCCC GGCACCCGGA TGCGGGACAT CAAGATCGAC
ACGGTCTTCC TGGGCTCCTG CACCAACGGT CGGATCGAGG ACCTGCGCGC CGCCGCCGAG
GTCCTCAAGG GCCGCAAGGT GGCCGACGGG GTGCGGATGC TGGTCGTCCC CGGCTCCCAG
CGGGTCAAGC AGCAGGCCGC GGCCGAGGGC CTCGACGAGA TCTTCAAGGC TGCTGGCGCC
GAGTGGCGTG AAGCGGGATG CTCGATGTGC CTGGGCATGA ACCCCGACAC GCTCAAGCCC
GGGGAGCGCA GCGCCTCCAC CTCCAACCGC AACTTCGAGG GCCGGCAGGG CAAGGGCGGC
CGCACCCACC TGGTGTCGCC GCTGGTCGCC GCCGCCACCG CGGTGCGCGG CACGCTGTCC
TCTCCCGCCG ACCTGTAG
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| Protein sequence | MARTMAEKVW EEHVVRRAEG EPDLLYIDLH LIHEVTSPQA FEGLRLANRK LRRPDLTIAT
EDHNVPTENI FLPIADPVSR TQVETLRKNA AEFGVRLHPM GDIDQGIVHV IGPQLGLTQP
GMTIVCGDSH TSTHGAFGAL AFGIGTSQVE HVMATQTLPM TPFKTMAVNV EGKLKPGVTA
KDIILAVIAQ IGTGGGQGHV IEYRGEAIRS LSMEARMTIC NMSIEAGARA GMIAPDQTTF
DYLKGRPHAP KGELWDQAVE YWKTLPTDEG AVFDKEVFLN ADELSPFVTW GTNPGQGVPL
DSVVPDPESF TDPVERAAAE KALAYMDLKP GTRMRDIKID TVFLGSCTNG RIEDLRAAAE
VLKGRKVADG VRMLVVPGSQ RVKQQAAAEG LDEIFKAAGA EWREAGCSMC LGMNPDTLKP
GERSASTSNR NFEGRQGKGG RTHLVSPLVA AATAVRGTLS SPADL
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