More than 300 homologs were found in PanDaTox collection
for query gene Msed_1288 on replicon NC_009440
Organism: Metallosphaera sedula DSM 5348



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009440  Msed_1288  binding-protein-dependent transport systems inner membrane component  100 
 
 
274 aa  535  1e-151  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
CP001800  Ssol_1977  binding-protein-dependent transport systems inner membrane component  81.62 
 
 
272 aa  468  1.0000000000000001e-131  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_010320  Teth514_2196  binding-protein-dependent transport systems inner membrane component  36.9 
 
 
285 aa  168  1e-40  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00879782  n/a   
 
 
-
 
NC_014210  Ndas_3354  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
299 aa  126  3e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  33.91 
 
 
307 aa  124  2e-27  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
296 aa  124  2e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_013169  Ksed_20480  carbohydrate ABC transporter membrane protein  29.29 
 
 
318 aa  121  9.999999999999999e-27  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0521728  normal  0.389193 
 
 
-
 
NC_011899  Hore_19880  binding-protein-dependent transport systems inner membrane component  31.68 
 
 
323 aa  119  4.9999999999999996e-26  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5386  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
283 aa  117  1.9999999999999998e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.992136 
 
 
-
 
NC_009664  Krad_1114  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
319 aa  115  6e-25  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.32149  normal  0.356013 
 
 
-
 
NC_007604  Synpcc7942_0949  permease protein of sugar ABC transporter  30.66 
 
 
292 aa  113  3e-24  Synechococcus elongatus PCC 7942  Bacteria  normal  0.688345  normal 
 
 
-
 
NC_009338  Mflv_3852  binding-protein-dependent transport systems inner membrane component  32.71 
 
 
310 aa  112  4.0000000000000004e-24  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0634568 
 
 
-
 
NC_008726  Mvan_2543  binding-protein-dependent transport systems inner membrane component  32.71 
 
 
310 aa  112  7.000000000000001e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.944367  normal 
 
 
-
 
NC_013757  Gobs_3933  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
320 aa  112  8.000000000000001e-24  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.292649  n/a   
 
 
-
 
NC_007484  Noc_0281  ABC transporter, inner membrane subunit  34.07 
 
 
292 aa  111  1.0000000000000001e-23  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1096  binding-protein-dependent transport systems inner membrane component  30.11 
 
 
315 aa  111  1.0000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.175054  normal 
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  29.08 
 
 
300 aa  110  2.0000000000000002e-23  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2236  binding-protein-dependent transport systems inner membrane component  30.66 
 
 
315 aa  110  4.0000000000000004e-23  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2679  binding-protein-dependent transport systems inner membrane component  30.45 
 
 
330 aa  109  6e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0306  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
294 aa  108  9.000000000000001e-23  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013744  Htur_4398  binding-protein-dependent transport systems inner membrane component  31.27 
 
 
314 aa  107  2e-22  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0144983  n/a   
 
 
-
 
NC_013525  Tter_0398  binding-protein-dependent transport systems inner membrane component  28.94 
 
 
312 aa  107  3e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012850  Rleg_2427  binding-protein-dependent transport systems inner membrane component  29.93 
 
 
322 aa  106  4e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.535373  normal  0.626108 
 
 
-
 
NC_011886  Achl_0624  binding-protein-dependent transport systems inner membrane component  28.62 
 
 
345 aa  105  6e-22  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.65014 
 
 
-
 
NC_009654  Mmwyl1_0024  binding-protein-dependent transport systems inner membrane component  28 
 
 
320 aa  105  6e-22  Marinomonas sp. MWYL1  Bacteria  normal  0.227719  normal  0.433481 
 
 
-
 
NC_012848  Rleg_4864  binding-protein-dependent transport systems inner membrane component  30.15 
 
 
319 aa  104  1e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.243677  normal  0.263269 
 
 
-
 
NC_010003  Pmob_0073  binding-protein-dependent transport systems inner membrane component  29.2 
 
 
294 aa  104  2e-21  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3668  binding-protein-dependent transport systems inner membrane component  29.15 
 
 
299 aa  104  2e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1681  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
316 aa  104  2e-21  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.130846  normal 
 
 
-
 
NC_008148  Rxyl_1990  binding-protein-dependent transport systems inner membrane component  28.75 
 
 
306 aa  103  3e-21  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.306567  n/a   
 
 
-
 
NC_008541  Arth_3686  binding-protein-dependent transport systems inner membrane component  39.35 
 
 
310 aa  103  3e-21  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6370  binding-protein-dependent transport systems inner membrane component  28.83 
 
 
318 aa  103  3e-21  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4645  binding-protein-dependent transport systems inner membrane component  32.42 
 
 
299 aa  103  4e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00190071 
 
 
-
 
NC_013411  GYMC61_2958  binding-protein-dependent transport systems inner membrane component  29.73 
 
 
435 aa  103  4e-21  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012803  Mlut_04590  permease component of ABC-type sugar transporter  31.34 
 
 
323 aa  103  4e-21  Micrococcus luteus NCTC 2665  Bacteria  normal  0.359187  n/a   
 
 
-
 
NC_009718  Fnod_0449  binding-protein-dependent transport systems inner membrane component  30.45 
 
 
295 aa  102  7e-21  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.982578  n/a   
 
 
-
 
NC_007333  Tfu_0935  multiple sugar transport system permease protein  32.77 
 
 
328 aa  102  8e-21  Thermobifida fusca YX  Bacteria  normal  0.36894  n/a   
 
 
-
 
NC_014165  Tbis_1088  binding-protein-dependent transporter inner membrane component  31.38 
 
 
288 aa  102  8e-21  Thermobispora bispora DSM 43833  Bacteria  normal  0.616528  hitchhiker  0.00755847 
 
 
-
 
NC_010483  TRQ2_1695  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
288 aa  102  8e-21  Thermotoga sp. RQ2  Bacteria  normal  0.967188  n/a   
 
 
-
 
NC_008786  Veis_1880  binding-protein-dependent transport systems inner membrane component  30.43 
 
 
286 aa  102  9e-21  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.262739  normal  0.333569 
 
 
-
 
NC_014158  Tpau_3529  binding-protein-dependent transport systems inner membrane component  29.14 
 
 
311 aa  102  9e-21  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2623  binding-protein-dependent transport systems inner membrane component  33.09 
 
 
330 aa  101  1e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0584633  normal 
 
 
-
 
NC_013440  Hoch_3145  binding-protein-dependent transport systems inner membrane component  30.08 
 
 
303 aa  101  1e-20  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.236219 
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  31.64 
 
 
298 aa  101  1e-20  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_3811  binding-protein-dependent transport systems inner membrane component  30.58 
 
 
328 aa  100  2e-20  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013923  Nmag_3872  binding-protein-dependent transport systems inner membrane component  31.22 
 
 
315 aa  100  3e-20  Natrialba magadii ATCC 43099  Archaea  normal  0.0566045  n/a   
 
 
-
 
NC_009664  Krad_4401  binding-protein-dependent transport systems inner membrane component  30.99 
 
 
316 aa  100  3e-20  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_2309  binding-protein-dependent transport systems inner membrane component  30 
 
 
427 aa  100  3e-20  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00000129291  n/a   
 
 
-
 
NC_008687  Pden_4441  binding-protein-dependent transport systems inner membrane component  29.46 
 
 
320 aa  100  3e-20  Paracoccus denitrificans PD1222  Bacteria  normal  0.0272526  normal 
 
 
-
 
NC_013530  Xcel_2796  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
355 aa  100  3e-20  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1216  binding-protein-dependent transport systems inner membrane component  32.3 
 
 
315 aa  100  3e-20  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00000228392  n/a   
 
 
-
 
NC_013202  Hmuk_0943  binding-protein-dependent transport systems inner membrane component  29.71 
 
 
312 aa  99.8  4e-20  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.301949 
 
 
-
 
NC_011899  Hore_22990  binding-protein-dependent transport systems inner membrane component  27.74 
 
 
286 aa  100  4e-20  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000108841  n/a   
 
 
-
 
NC_010676  Bphyt_5637  binding-protein-dependent transport systems inner membrane component  29.2 
 
 
318 aa  99.4  6e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4016  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
338 aa  99  7e-20  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0789775 
 
 
-
 
NC_010003  Pmob_1491  binding-protein-dependent transport systems inner membrane component  29.37 
 
 
289 aa  98.6  9e-20  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  31.67 
 
 
306 aa  98.2  1e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0671  binding-protein-dependent transport systems inner membrane component  33.97 
 
 
281 aa  98.2  1e-19  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.279837 
 
 
-
 
NC_013124  Afer_1330  binding-protein-dependent transport systems inner membrane component  30.22 
 
 
316 aa  97.8  2e-19  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0870  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
309 aa  97.8  2e-19  Nocardioides sp. JS614  Bacteria  normal  0.800905  n/a   
 
 
-
 
NC_014211  Ndas_5073  binding-protein-dependent transport systems inner membrane component  32.35 
 
 
330 aa  97.8  2e-19  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1819  binding-protein-dependent transport systems inner membrane component  29.39 
 
 
293 aa  97.8  2e-19  Thermosipho melanesiensis BI429  Bacteria  normal  0.215175  n/a   
 
 
-
 
NC_013093  Amir_0349  binding-protein-dependent transport systems inner membrane component  28.31 
 
 
305 aa  97.4  2e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_1089  binding-protein-dependent transport systems inner membrane component  28.8 
 
 
290 aa  96.7  3e-19  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000136101  n/a   
 
 
-
 
NC_009620  Smed_3590  binding-protein-dependent transport systems inner membrane component  29.45 
 
 
301 aa  97.1  3e-19  Sinorhizobium medicae WSM419  Bacteria  normal  0.657903  normal 
 
 
-
 
NC_012848  Rleg_5336  binding-protein-dependent transport systems inner membrane component  30.94 
 
 
310 aa  96.3  4e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.369054 
 
 
-
 
NC_013526  Tter_2052  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
291 aa  96.7  4e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3307  sugar transport system (permease)  27.49 
 
 
325 aa  96.7  4e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.175437 
 
 
-
 
NC_013131  Caci_6903  binding-protein-dependent transport systems inner membrane component  28.68 
 
 
324 aa  96.3  5e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0156181  normal  0.0141251 
 
 
-
 
NC_008541  Arth_0414  binding-protein-dependent transport systems inner membrane component  33.54 
 
 
345 aa  96.3  5e-19  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0187  binding-protein-dependent transport systems inner membrane component  30.93 
 
 
307 aa  96.3  5e-19  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5492  binding-protein-dependent transport systems inner membrane component  30.73 
 
 
328 aa  95.9  6e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.511246  normal  0.17987 
 
 
-
 
NC_014210  Ndas_2364  binding-protein-dependent transport systems inner membrane component  29.46 
 
 
661 aa  95.9  6e-19  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.824137  normal  0.513217 
 
 
-
 
NC_012912  Dd1591_3241  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
290 aa  95.9  6e-19  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_06500  carbohydrate ABC transporter membrane protein  32.02 
 
 
321 aa  95.5  7e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_1584  binding-protein-dependent transport systems inner membrane component  31.45 
 
 
281 aa  95.9  7e-19  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11261  sugar-transport integral membrane protein ABC transporter sugA  31.32 
 
 
307 aa  95.9  7e-19  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00812399 
 
 
-
 
NC_008025  Dgeo_0590  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
315 aa  95.5  8e-19  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.273483  normal 
 
 
-
 
NC_004311  BRA0749  sugar ABC transporter, permease protein, putative  26.07 
 
 
289 aa  95.1  1e-18  Brucella suis 1330  Bacteria  normal  0.444567  n/a   
 
 
-
 
NC_007511  Bcep18194_B0940  ABC sugar transporter, inner membrane subunit  36.14 
 
 
289 aa  94.7  1e-18  Burkholderia sp. 383  Bacteria  normal  normal  0.298922 
 
 
-
 
NC_011368  Rleg2_4759  binding-protein-dependent transport systems inner membrane component  27.94 
 
 
305 aa  94.4  2e-18  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.536489  normal 
 
 
-
 
NC_010483  TRQ2_0670  binding-protein-dependent transport systems inner membrane component  29.6 
 
 
294 aa  94.4  2e-18  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03710  carbohydrate ABC transporter membrane protein  32.53 
 
 
332 aa  94  2e-18  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.899537 
 
 
-
 
NC_009668  Oant_2941  binding-protein-dependent transport systems inner membrane component  29.13 
 
 
320 aa  94  2e-18  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.974377  n/a   
 
 
-
 
NC_008061  Bcen_3593  binding-protein-dependent transport systems inner membrane component  36.63 
 
 
289 aa  94.4  2e-18  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_011366  Rleg2_5714  binding-protein-dependent transport systems inner membrane component  30.57 
 
 
310 aa  94.4  2e-18  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.568061 
 
 
-
 
NC_008543  Bcen2424_4774  binding-protein-dependent transport systems inner membrane component  36.63 
 
 
289 aa  94.4  2e-18  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.808754 
 
 
-
 
NC_013947  Snas_2734  binding-protein-dependent transport systems inner membrane component  31.06 
 
 
308 aa  94.4  2e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.172129  normal  0.124427 
 
 
-
 
NC_010515  Bcenmc03_5509  binding-protein-dependent transport systems inner membrane component  36.63 
 
 
289 aa  94.4  2e-18  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.438366  normal 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  28.92 
 
 
295 aa  94.4  2e-18  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4985  binding-protein-dependent transport systems inner membrane component  31.95 
 
 
313 aa  94.7  2e-18  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00226923  hitchhiker  0.00373728 
 
 
-
 
NC_007643  Rru_A1261  binding-protein dependent transport system inner membrane protein  34.31 
 
 
298 aa  94  3e-18  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.196832  n/a   
 
 
-
 
NC_013947  Snas_1042  binding-protein-dependent transport systems inner membrane component  31.36 
 
 
292 aa  94  3e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0233696  normal  0.724909 
 
 
-
 
NC_009504  BOV_A0699  putative sugar ABC transporter, permease protein  25.71 
 
 
289 aa  93.6  3e-18  Brucella ovis ATCC 25840  Bacteria  normal  0.383075  n/a   
 
 
-
 
NC_013093  Amir_0808  binding-protein-dependent transport systems inner membrane component  30.88 
 
 
318 aa  93.6  3e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2296  binding-protein-dependent transport systems inner membrane component  36.63 
 
 
304 aa  93.2  4e-18  Serratia proteamaculans 568  Bacteria  normal  0.44429  normal 
 
 
-
 
NC_011899  Hore_00790  binding-protein-dependent transport systems inner membrane component  28.78 
 
 
262 aa  93.2  4e-18  Halothermothrix orenii H 168  Bacteria  normal  0.772214  n/a   
 
 
-
 
NC_008391  Bamb_4157  binding-protein-dependent transport systems inner membrane component  36.14 
 
 
289 aa  93.2  4e-18  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0971  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
293 aa  93.2  4e-18  Thermotoga sp. RQ2  Bacteria  normal  0.0994152  n/a   
 
 
-
 
NC_009486  Tpet_0955  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
293 aa  93.2  4e-18  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
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