Gene Sked_03710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_03710 
Symbol 
ID8632009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp414364 
End bp415362 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content69% 
IMG OID 
Productcarbohydrate ABC transporter membrane protein 
Protein accessionYP_003313172 
Protein GI269793717 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.899537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA GCACGACGGA CGCACCGTCG CTCCCCGAGG CCAGCCCGGC CACGTCGTCG 
ACGACGGGAC GCGCATCCCG CGGACCCAAG GCTTCGCGTG GGCTGAAGGC CCCGCGCACC
TTCGAGCAGG CGAACCGCCG GCTCAAGTGG CTGATGCTGT CCCCGGCCCT CGCCTTCGTC
GGGCTGATGA TCGTGTTCCC GCTGATCTTC ACGGTGAACC TCAGCTTCAC CGACGCCTTC
GGTGCCGTGA ACGCCGACAA CCGCTACATC GGGTTCCAGA ACTACGCCGA CGCCCTGAGC
GACGCCCGCC GGTTCTGGCC GGCCGCCTGG CGCACCGTGA TCTTCACGGT CGTCGCCGTC
ACCCTCGAGG TGGTCCTCGG CCTGGCCCTC GCGATGCTCA TGCGCAAGGC CTTCCGCGGC
ATGCGCATGG TCCGCACGGT GCTCATGATC CCGCTGCTCG CGACGCCCGT GGCCATCGGC
ATCCTCTGGC TGCTCATCCT CGACCCGACC AACGGCATCG CGAACCACCT GCTGGGCTTC
GTCGGCATCC CGCCGCAGGA GTTCCTCGGG TCGGTCAGCC AGTCGCTGCC CACCCTCATG
CTCATCGACG TGTGGCAGTG GACGCCCATG ATGACGCTGC TGCTCCTCGC CGGGCTCACC
ACCCTGCCCG AGGAGCCCGA GGAGGCGGCC CGCGTCGACG GCGCGACGGC CTGGCAGCGG
TTCCGGCACA TCATCCTGCC GATGCTCTGG ACCACCCTGC TCACCGCGCT GGTGCTGCGG
GCGGTCGACG CCCTCAAGAC CTTCGACATC CTCTACGCCA CCAAGGGCGC AGGCGGCGGG
TCGAGCTTCG AGGTCGAGAC GCTCAACGTG TACGCCTACG GCCTCACCTT CGACTACCAG
GAGTACGGCC TCGCCTCGGC GGTCCTCGTC CTCTTCACCC TGTTCATCAT CGGAGTCGTC
GTCCTGCTGC GCCTCCGCTC CGGAAGGAAG TCCGCATGA
 
Protein sequence
MSRSTTDAPS LPEASPATSS TTGRASRGPK ASRGLKAPRT FEQANRRLKW LMLSPALAFV 
GLMIVFPLIF TVNLSFTDAF GAVNADNRYI GFQNYADALS DARRFWPAAW RTVIFTVVAV
TLEVVLGLAL AMLMRKAFRG MRMVRTVLMI PLLATPVAIG ILWLLILDPT NGIANHLLGF
VGIPPQEFLG SVSQSLPTLM LIDVWQWTPM MTLLLLAGLT TLPEEPEEAA RVDGATAWQR
FRHIILPMLW TTLLTALVLR AVDALKTFDI LYATKGAGGG SSFEVETLNV YAYGLTFDYQ
EYGLASAVLV LFTLFIIGVV VLLRLRSGRK SA