More than 300 homologs were found in PanDaTox collection
for query gene Sked_03710 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_03710  carbohydrate ABC transporter membrane protein  100 
 
 
332 aa  659    Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.899537 
 
 
-
 
NC_009664  Krad_4401  binding-protein-dependent transport systems inner membrane component  80.26 
 
 
316 aa  492  9.999999999999999e-139  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0362  binding-protein-dependent transport systems inner membrane component  36.42 
 
 
312 aa  221  9.999999999999999e-57  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.541424  n/a   
 
 
-
 
NC_007908  Rfer_0953  binding-protein-dependent transport systems inner membrane component  43.89 
 
 
292 aa  212  5.999999999999999e-54  Rhodoferax ferrireducens T118  Bacteria  normal  0.568052  n/a   
 
 
-
 
NC_012848  Rleg_5199  binding-protein-dependent transport systems inner membrane component  35.46 
 
 
312 aa  210  3e-53  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0867066 
 
 
-
 
NC_011368  Rleg2_5469  binding-protein-dependent transport systems inner membrane component  35.51 
 
 
313 aa  209  5e-53  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.394829 
 
 
-
 
NC_009485  BBta_1755  ABC transporter permease  37.07 
 
 
312 aa  203  3e-51  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.576454  normal  0.392142 
 
 
-
 
NC_008010  Dgeo_2820  binding-protein-dependent transport systems inner membrane component  39.41 
 
 
305 aa  192  9e-48  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1048  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
308 aa  190  2.9999999999999997e-47  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5739  ABC transporter permease  36.27 
 
 
318 aa  184  2.0000000000000003e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.184804 
 
 
-
 
NC_007643  Rru_A1261  binding-protein dependent transport system inner membrane protein  37.6 
 
 
298 aa  182  8.000000000000001e-45  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.196832  n/a   
 
 
-
 
NC_010465  YPK_2279  binding-protein-dependent transport systems inner membrane component  39.74 
 
 
286 aa  179  4.999999999999999e-44  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2171  carbohydrate ABC transporter permease  39.74 
 
 
280 aa  179  5.999999999999999e-44  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0580768  n/a   
 
 
-
 
NC_010159  YpAngola_A2083  carbohydrate ABC transporter permease  39.32 
 
 
286 aa  177  3e-43  Yersinia pestis Angola  Bacteria  normal  normal  0.0183943 
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  37.06 
 
 
296 aa  173  2.9999999999999996e-42  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_008146  Mmcs_2419  binding-protein-dependent transport systems inner membrane component  40.32 
 
 
286 aa  173  3.9999999999999995e-42  Mycobacterium sp. MCS  Bacteria  normal  0.235933  n/a   
 
 
-
 
NC_008705  Mkms_2464  binding-protein-dependent transport systems inner membrane component  40.32 
 
 
286 aa  173  3.9999999999999995e-42  Mycobacterium sp. KMS  Bacteria  normal  0.80505  normal 
 
 
-
 
NC_009077  Mjls_2458  binding-protein-dependent transport systems inner membrane component  40.32 
 
 
286 aa  173  3.9999999999999995e-42  Mycobacterium sp. JLS  Bacteria  normal  0.524108  normal 
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  36.07 
 
 
307 aa  172  5.999999999999999e-42  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_009636  Smed_2455  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
313 aa  172  7.999999999999999e-42  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0803  binding-protein-dependent transport systems inner membrane component  38.52 
 
 
299 aa  171  1e-41  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.270687  normal 
 
 
-
 
NC_010003  Pmob_0306  binding-protein-dependent transport systems inner membrane component  38.02 
 
 
294 aa  170  3e-41  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2958  binding-protein-dependent transport systems inner membrane component  38.84 
 
 
435 aa  169  5e-41  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009832  Spro_2525  binding-protein-dependent transport systems inner membrane component  33.75 
 
 
330 aa  164  2.0000000000000002e-39  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_0645  binding-protein-dependent transport systems inner membrane component  34.97 
 
 
309 aa  164  2.0000000000000002e-39  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000282921  n/a   
 
 
-
 
NC_012850  Rleg_2284  binding-protein-dependent transport systems inner membrane component  34.51 
 
 
291 aa  162  5.0000000000000005e-39  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.257134 
 
 
-
 
NC_010676  Bphyt_5637  binding-protein-dependent transport systems inner membrane component  33 
 
 
318 aa  161  1e-38  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0670  binding-protein-dependent transport systems inner membrane component  34.81 
 
 
294 aa  160  2e-38  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2698  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
295 aa  160  2e-38  Sinorhizobium medicae WSM419  Bacteria  normal  0.0832027  normal 
 
 
-
 
NC_008726  Mvan_2623  binding-protein-dependent transport systems inner membrane component  38.02 
 
 
287 aa  158  1e-37  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0398  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
312 aa  158  1e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010625  Bphy_6370  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
318 aa  157  2e-37  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3686  binding-protein-dependent transport systems inner membrane component  33.1 
 
 
310 aa  155  7e-37  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1990  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
306 aa  154  1e-36  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.306567  n/a   
 
 
-
 
NC_009718  Fnod_0449  binding-protein-dependent transport systems inner membrane component  35.99 
 
 
295 aa  154  1e-36  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.982578  n/a   
 
 
-
 
NC_009338  Mflv_3776  binding-protein-dependent transport systems inner membrane component  35.56 
 
 
286 aa  155  1e-36  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.771132  normal  0.363599 
 
 
-
 
NC_012791  Vapar_3349  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
291 aa  154  2.9999999999999998e-36  Variovorax paradoxus S110  Bacteria  normal  0.230089  n/a   
 
 
-
 
NC_007963  Csal_0259  binding-protein-dependent transport systems inner membrane component  30.65 
 
 
324 aa  154  2.9999999999999998e-36  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3354  binding-protein-dependent transport systems inner membrane component  34.77 
 
 
299 aa  152  5.9999999999999996e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2595  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
318 aa  152  8e-36  Mycobacterium sp. JLS  Bacteria  normal  0.177004  normal  0.445691 
 
 
-
 
NC_013131  Caci_2623  binding-protein-dependent transport systems inner membrane component  35.16 
 
 
330 aa  151  1e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0584633  normal 
 
 
-
 
NC_008146  Mmcs_2556  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
318 aa  152  1e-35  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2601  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
318 aa  152  1e-35  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0305  sugar ABC transporter, permease protein  30.42 
 
 
325 aa  151  2e-35  Brucella suis 1330  Bacteria  normal  0.0474821  n/a   
 
 
-
 
NC_010320  Teth514_1092  binding-protein-dependent transport systems inner membrane component  31.29 
 
 
291 aa  150  2e-35  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0280  sugar ABC transporter, permease protein  30.42 
 
 
325 aa  150  3e-35  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2091  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
292 aa  149  7e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_007488  RSP_7366  ABC sugar transporter, inner membrane subunit  39.93 
 
 
278 aa  148  1.0000000000000001e-34  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0828384  n/a   
 
 
-
 
NC_009616  Tmel_1819  binding-protein-dependent transport systems inner membrane component  35.09 
 
 
293 aa  148  1.0000000000000001e-34  Thermosipho melanesiensis BI429  Bacteria  normal  0.215175  n/a   
 
 
-
 
NC_008699  Noca_3682  binding-protein-dependent transport systems inner membrane component  37.6 
 
 
283 aa  148  2.0000000000000003e-34  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4356  binding-protein-dependent transport systems inner membrane component  38.11 
 
 
325 aa  147  3e-34  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_2941  binding-protein-dependent transport systems inner membrane component  28.89 
 
 
320 aa  147  3e-34  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.974377  n/a   
 
 
-
 
NC_008705  Mkms_4442  binding-protein-dependent transport systems inner membrane component  38.11 
 
 
325 aa  147  3e-34  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0640685 
 
 
-
 
NC_012034  Athe_2309  binding-protein-dependent transport systems inner membrane component  35.08 
 
 
427 aa  146  5e-34  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00000129291  n/a   
 
 
-
 
NC_007963  Csal_2611  binding-protein-dependent transport systems inner membrane component  32.96 
 
 
280 aa  145  6e-34  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1096  binding-protein-dependent transport systems inner membrane component  34.91 
 
 
315 aa  145  7.0000000000000006e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.175054  normal 
 
 
-
 
NC_010003  Pmob_0028  binding-protein-dependent transport systems inner membrane component  34.11 
 
 
300 aa  145  8.000000000000001e-34  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000378352  n/a   
 
 
-
 
NC_007802  Jann_1389  binding-protein-dependent transport systems inner membrane component  31.93 
 
 
300 aa  145  1e-33  Jannaschia sp. CCS1  Bacteria  normal  0.0114019  normal  0.0892858 
 
 
-
 
NC_013526  Tter_2052  binding-protein-dependent transport systems inner membrane component  36 
 
 
291 aa  145  1e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4941  binding-protein-dependent transport systems inner membrane component  31.99 
 
 
309 aa  144  1e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2296  binding-protein-dependent transport systems inner membrane component  36.67 
 
 
304 aa  145  1e-33  Serratia proteamaculans 568  Bacteria  normal  0.44429  normal 
 
 
-
 
NC_009664  Krad_1114  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
319 aa  144  2e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.32149  normal  0.356013 
 
 
-
 
NC_013595  Sros_3494  binding-protein-dependent transport systems inner membrane component  30.84 
 
 
311 aa  143  3e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.716912  normal  0.704951 
 
 
-
 
NC_010816  BLD_1304  MalF-type ABC sugar transport systems permease component  30.16 
 
 
334 aa  143  4e-33  Bifidobacterium longum DJO10A  Bacteria  decreased coverage  0.00913134  n/a   
 
 
-
 
NC_012850  Rleg_2427  binding-protein-dependent transport systems inner membrane component  29.72 
 
 
322 aa  143  5e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.535373  normal  0.626108 
 
 
-
 
NC_010627  Bphy_7450  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
316 aa  143  5e-33  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  34.35 
 
 
305 aa  142  6e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
312 aa  141  9.999999999999999e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_011369  Rleg2_3668  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
299 aa  141  9.999999999999999e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0073  binding-protein-dependent transport systems inner membrane component  29.27 
 
 
294 aa  140  1.9999999999999998e-32  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A4017  carbohydrate ABC transporter permease  31.5 
 
 
294 aa  140  1.9999999999999998e-32  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  30 
 
 
299 aa  140  1.9999999999999998e-32  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4864  binding-protein-dependent transport systems inner membrane component  31.88 
 
 
319 aa  141  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.243677  normal  0.263269 
 
 
-
 
NC_009972  Haur_4034  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
303 aa  140  3e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3708  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
294 aa  140  3e-32  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3574  carbohydrate ABC transporter permease  30.86 
 
 
294 aa  140  3e-32  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3933  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
320 aa  140  3e-32  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.292649  n/a   
 
 
-
 
NC_010552  BamMC406_4681  binding-protein-dependent transport systems inner membrane component  39.24 
 
 
289 aa  140  3.9999999999999997e-32  Burkholderia ambifaria MC40-6  Bacteria  normal  0.205446  normal 
 
 
-
 
NC_011899  Hore_22990  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
286 aa  140  3.9999999999999997e-32  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000108841  n/a   
 
 
-
 
NC_012669  Bcav_1681  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
316 aa  139  4.999999999999999e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.130846  normal 
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  34 
 
 
310 aa  139  4.999999999999999e-32  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_4736  binding-protein-dependent transport systems inner membrane component  38.26 
 
 
325 aa  139  6e-32  Mycobacterium sp. JLS  Bacteria  normal  0.465558  normal 
 
 
-
 
NC_009485  BBta_7824  putative ABC transporter permease protein  34.15 
 
 
295 aa  139  6e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  32.64 
 
 
316 aa  139  8.999999999999999e-32  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_20480  carbohydrate ABC transporter membrane protein  31.33 
 
 
318 aa  139  8.999999999999999e-32  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0521728  normal  0.389193 
 
 
-
 
NC_011369  Rleg2_0257  binding-protein-dependent transport systems inner membrane component  34.03 
 
 
291 aa  139  8.999999999999999e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.958787  normal 
 
 
-
 
NC_009620  Smed_3811  binding-protein-dependent transport systems inner membrane component  29.15 
 
 
328 aa  139  8.999999999999999e-32  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4616  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
331 aa  138  1e-31  Frankia sp. EAN1pec  Bacteria  normal  0.338244  normal 
 
 
-
 
NC_007511  Bcep18194_B0940  ABC sugar transporter, inner membrane subunit  38.4 
 
 
289 aa  138  1e-31  Burkholderia sp. 383  Bacteria  normal  normal  0.298922 
 
 
-
 
NC_007650  BTH_II1178  sugar ABC transporter, permease protein, putative  33.95 
 
 
292 aa  138  1e-31  Burkholderia thailandensis E264  Bacteria  normal  0.0204998  n/a   
 
 
-
 
NC_013530  Xcel_2796  binding-protein-dependent transport systems inner membrane component  36.3 
 
 
355 aa  138  1e-31  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4077  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
317 aa  137  2e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.140823  normal  0.731226 
 
 
-
 
NC_010483  TRQ2_0971  binding-protein-dependent transport systems inner membrane component  35.31 
 
 
293 aa  137  2e-31  Thermotoga sp. RQ2  Bacteria  normal  0.0994152  n/a   
 
 
-
 
NC_010515  Bcenmc03_5509  binding-protein-dependent transport systems inner membrane component  38.82 
 
 
289 aa  138  2e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.438366  normal 
 
 
-
 
NC_008061  Bcen_3593  binding-protein-dependent transport systems inner membrane component  38.82 
 
 
289 aa  138  2e-31  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_06500  carbohydrate ABC transporter membrane protein  35.58 
 
 
321 aa  138  2e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_4774  binding-protein-dependent transport systems inner membrane component  38.82 
 
 
289 aa  138  2e-31  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.808754 
 
 
-
 
NC_008786  Veis_2012  binding-protein-dependent transport systems inner membrane component  34.32 
 
 
310 aa  137  2e-31  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.395958 
 
 
-
 
NC_009486  Tpet_0955  binding-protein-dependent transport systems inner membrane component  35.31 
 
 
293 aa  137  2e-31  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5859  binding-protein-dependent transport systems inner membrane component  30.36 
 
 
301 aa  137  2e-31  Sinorhizobium medicae WSM419  Bacteria  normal  0.173304  normal 
 
 
-
 
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