| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_20480 |
|---|
| Symbol | |
|---|
| ID | 8373552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 2125764 |
|---|
| End bp | 2126720 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644992297 |
|---|
| Product | carbohydrate ABC transporter membrane protein |
|---|
| Protein accession | YP_003149807 |
|---|
| Protein GI | 256825847 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.0521728 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.389193 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCG CCGTCGACCA CGCACCGGAG GCCGGGGGCA CCCCCCGGGC CGGCAAGCGC
AGGATGAGCG ACCGGGCCCG GGGGGAACGC AACCTCGGCT GGATGCTGAG CGCTCCGGCC
TTCCTCATCA TGATCGGGGT CACGCTCTTC CCGATCCTGT ACGCCCTGTA CAACTCGCTG
TTCCGCTTCC GGCTCACCGA CCCCGACAGC AAGGCCTTCG TCGGGCTCAA CAACTACGTC
ACGGCCCTCT CGGACGGCTA CTGGTGGCAG GCCACGGGCG TCACGGCCCT CATCACCGTC
ATCACCGTGG TGGTCGAGCT CGTGCTGGGC TTCGGCATCG CCCTGCTGAT GCACCGGGTG
GTGCTGCCGC GGCGGACGCT GCGCACCATC GTGCTGATCC CGTACTCGAT CATCACCGTG
GTCTCGGCCT ACGCCTGGCT GTACGCCTTC CGCGTGGACA CCGGCTTCGT GAACCACTGG
GCCAACACGC TGACCTTCGG AGCCTTCGGC GCCGACTTCA ACTGGTTCGG CTCGTTCTGG
CCGGCCGTCA CGGTCATCTC GATGTCCGAG ATCTGGAAGA CCACCCCGTT CATGTCGCTG
CTGCTGCTCG CCGGTCTGGC GCAGATCGAC GGCGCGATGG AGGAGGCCGC CAAGGTGGAC
GGCGCCAGCT TCTGGCAGCG CCTGACCAAG GTGGTCCTGC CCAACATGAA GGCCGCCGTG
ATGGTGGCGC TGCTGTTCCG CACCCTGGAT GCCTTCCGCA TCTTCGACAA CCCGTTCATC
ATGACCGGCG GTGCGAACGA CACCTCGACA CTCTCGATGG TGGTCTACCG CCAGACCATC
GAACGCATGG ACATCGGGCT CGGCTCGGCA CTGTCGGTGC TGCTGTTCCT CTACGTGGTG
ATCATCGCGT TCATCTTCGT CAAGGTGTTC AACGTCAACC TGACGGAAGG GAAGTGA
|
|---|
| Protein sequence | MSTAVDHAPE AGGTPRAGKR RMSDRARGER NLGWMLSAPA FLIMIGVTLF PILYALYNSL
FRFRLTDPDS KAFVGLNNYV TALSDGYWWQ ATGVTALITV ITVVVELVLG FGIALLMHRV
VLPRRTLRTI VLIPYSIITV VSAYAWLYAF RVDTGFVNHW ANTLTFGAFG ADFNWFGSFW
PAVTVISMSE IWKTTPFMSL LLLAGLAQID GAMEEAAKVD GASFWQRLTK VVLPNMKAAV
MVALLFRTLD AFRIFDNPFI MTGGANDTST LSMVVYRQTI ERMDIGLGSA LSVLLFLYVV
IIAFIFVKVF NVNLTEGK
|
|---|
| |