| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1178 |
|---|
| Symbol | |
|---|
| ID | 3845190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 1376535 |
|---|
| End bp | 1377413 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637838481 |
|---|
| Product | sugar ABC transporter, permease protein, putative |
|---|
| Protein accession | YP_439375 |
|---|
| Protein GI | 83716860 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0204998 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAATC ATGGCAAGAC GAGCCTGCCC TGGCTCTTTC TCGGCCCGCC GCTCGCGCTG
ATGGCGGTGC TCGGCCTCGT GCCGACGATC GCCGCGATCA ACCTCGCGCT GAAGAACCGC
GTGCTGCGCT ACGCGGACAG CGACTACGTC GGCCTGCGCA ACTTCGCGCG GCTCGCGTCG
GACCGGCGCT TCCTGAACGC GGTCGAAGTG TCGGCGCTAT GGGAAATCGC CACGGTCGCG
GGCGCGGTGG CCGTCGGCAT CGTGCTCGCC GTGTTCCTGT TCGAGCGCGT GCACGGCCGT
TGGCGCCGCG CCGCGGTGCT GATCCTGATC GTGCCGGTGC TGCTGCCGCG CGTGTCGGCC
GCGTTCATCT GGAAGTTCAT GTACGCGCCG CTCACGGGCA TCCTGAGCTG GCTGCTCGGC
GCGTTCGGCA TCTCGAACGC GGCGCTCCTC GCCGATCCGC ATCTCGCGCT TGCCGCGGTC
GCGCTCGTCG ACGTCTGGCA ATGGGGCCTC TTCTTCTCCG TCGTCGTGCT GAAGCTGCTC
GAGACGCTGC CGCCCGAGCC GCTCGAAGCG GCGCGGCTCG ACTACGCGTC GACGTGGCAG
GTCTATGCGT ACATCGCGCT GCCGATGCTC AAGGCGCCGA TCATGAGCCT CGTGTTCATC
AAGATGGTCG AATCGCTGCG CTCGTTCGAT CTCATCTACG TGATGACGAA AGGCGGCCCC
GGCATCTCGA CCGAGACGCT CGACATGTAC GCGTACGCGC AAGGCATCGG GCTGTCCGGC
AAGGTGTCGT ACGCGTCGAG CATGGCGGTG CTGATGATGG TCGCGACGAC GCTCGTGTTC
ACGTTCATCT GGAAGCGGGT CGACAAATGG GACGACTGA
|
|---|
| Protein sequence | MFNHGKTSLP WLFLGPPLAL MAVLGLVPTI AAINLALKNR VLRYADSDYV GLRNFARLAS
DRRFLNAVEV SALWEIATVA GAVAVGIVLA VFLFERVHGR WRRAAVLILI VPVLLPRVSA
AFIWKFMYAP LTGILSWLLG AFGISNAALL ADPHLALAAV ALVDVWQWGL FFSVVVLKLL
ETLPPEPLEA ARLDYASTWQ VYAYIALPML KAPIMSLVFI KMVESLRSFD LIYVMTKGGP
GISTETLDMY AYAQGIGLSG KVSYASSMAV LMMVATTLVF TFIWKRVDKW DD
|
|---|
| |