Gene Mflv_3852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3852 
Symbol 
ID4975168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4114878 
End bp4115810 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content64% 
IMG OID640458076 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001135112 
Protein GI145224434 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0634568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCAC CGGCAGACGC CCCCATCCAG AAGGACCCGG GTAAACCCTC GGTCAGCGAG 
CGCGCCAAAG GCGAACGCCG GCTCGGGCTC TACCTGACCC TGCCCTCGTA TGTGGTGATG
CTGCTCGTCA CCGCCTACCC GCTCGGCTAC GCGCTGGTGT TGTCGCTGTA CAACTTCCGG
CTCACCGACC CCGAGGGCCG CAGTTTCGTC GGCCTGGGCA ACTACCTCGT CATCCTGACC
GACCCGATCT GGTGGAACGA CTTCGTCACC ACGTTGGCGA TCACCGTGGT GACGGTGGCC
ATCGAACTGG TACTCGGGTT CTGGTTCGCG TTCGTGATGC TGCGCATCGT GCGGGGCCGG
GGCCCGTTGC GCACGGCGAT CCTGATCCCG TACGGCATCG TCACGGTGGT CTCGGCGTTC
ATCTGGCGCT ACGCGTTCGC CATCGACTCC GGCTTCGTCA ACCAGTGGCT CAACCTGACC
GACTTCGACT GGTTCGGAGA CCGCTGGTCG GCCATCTTCG TGATCTGCCT GTCCGAGATC
TGGAAGACCA CCCCCTTCAT CTCGCTGCTG CTGCTCGCAG GCCTGGTCCA GGTCCCCGAG
GACATGCAGG AGGCCGCGAA GGTCGACGGC GCCACGGCGT GGCAGCGGTT GTGGAAGATC
ACGCTGCCGA ACATGAAGGC GGCGATCATG GTCGCTCTGC TGTTCCGCAC GCTGGACGCG
TGGCGCATCT TCGACAATCC GTACGTGATG ACGGCCGGCG CCAACAACAC CGAGACCATC
TCGTTCCTGG CCTACCGGCA GAACGTGACA CTGGTCAATC TCGGTATGGG ATCGGCGGTC
TCGGTACTGC TGTTCCTGTC GGTCGTCGCG ATCGCGTGGA TATTCATCAA GGTCTTCAAG
ACCGACCTCT CGCAAGTCAG GGGTGACCAG TGA
 
Protein sequence
MTAPADAPIQ KDPGKPSVSE RAKGERRLGL YLTLPSYVVM LLVTAYPLGY ALVLSLYNFR 
LTDPEGRSFV GLGNYLVILT DPIWWNDFVT TLAITVVTVA IELVLGFWFA FVMLRIVRGR
GPLRTAILIP YGIVTVVSAF IWRYAFAIDS GFVNQWLNLT DFDWFGDRWS AIFVICLSEI
WKTTPFISLL LLAGLVQVPE DMQEAAKVDG ATAWQRLWKI TLPNMKAAIM VALLFRTLDA
WRIFDNPYVM TAGANNTETI SFLAYRQNVT LVNLGMGSAV SVLLFLSVVA IAWIFIKVFK
TDLSQVRGDQ