More than 300 homologs were found in PanDaTox collection
for query gene Afer_1330 on replicon NC_013124
Organism: Acidimicrobium ferrooxidans DSM 10331



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013124  Afer_1330  binding-protein-dependent transport systems inner membrane component  100 
 
 
316 aa  617  1e-176  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2236  binding-protein-dependent transport systems inner membrane component  50 
 
 
315 aa  300  2e-80  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  39.86 
 
 
307 aa  199  3.9999999999999996e-50  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_012034  Athe_2309  binding-protein-dependent transport systems inner membrane component  38.84 
 
 
427 aa  195  8.000000000000001e-49  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00000129291  n/a   
 
 
-
 
NC_007604  Synpcc7942_0949  permease protein of sugar ABC transporter  42.38 
 
 
292 aa  189  4e-47  Synechococcus elongatus PCC 7942  Bacteria  normal  0.688345  normal 
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  36.61 
 
 
296 aa  188  8e-47  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_013525  Tter_0398  binding-protein-dependent transport systems inner membrane component  37.28 
 
 
312 aa  186  3e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_2958  binding-protein-dependent transport systems inner membrane component  42.34 
 
 
435 aa  181  1e-44  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_004311  BRA0305  sugar ABC transporter, permease protein  34.27 
 
 
325 aa  180  2.9999999999999997e-44  Brucella suis 1330  Bacteria  normal  0.0474821  n/a   
 
 
-
 
NC_009504  BOV_A0280  sugar ABC transporter, permease protein  34.58 
 
 
325 aa  179  4e-44  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3852  binding-protein-dependent transport systems inner membrane component  34.92 
 
 
310 aa  177  2e-43  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0634568 
 
 
-
 
NC_008541  Arth_3686  binding-protein-dependent transport systems inner membrane component  38.19 
 
 
310 aa  176  5e-43  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_2941  binding-protein-dependent transport systems inner membrane component  32.81 
 
 
320 aa  176  7e-43  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.974377  n/a   
 
 
-
 
NC_008699  Noca_0870  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
309 aa  174  1.9999999999999998e-42  Nocardioides sp. JS614  Bacteria  normal  0.800905  n/a   
 
 
-
 
NC_008726  Mvan_2543  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
310 aa  174  1.9999999999999998e-42  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.944367  normal 
 
 
-
 
NC_009664  Krad_1114  binding-protein-dependent transport systems inner membrane component  34.85 
 
 
319 aa  171  2e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.32149  normal  0.356013 
 
 
-
 
NC_009718  Fnod_0449  binding-protein-dependent transport systems inner membrane component  32.45 
 
 
295 aa  170  3e-41  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.982578  n/a   
 
 
-
 
NC_011368  Rleg2_5492  binding-protein-dependent transport systems inner membrane component  30.56 
 
 
328 aa  169  5e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.511246  normal  0.17987 
 
 
-
 
NC_009654  Mmwyl1_0024  binding-protein-dependent transport systems inner membrane component  34.49 
 
 
320 aa  168  1e-40  Marinomonas sp. MWYL1  Bacteria  normal  0.227719  normal  0.433481 
 
 
-
 
NC_010483  TRQ2_0971  binding-protein-dependent transport systems inner membrane component  34.35 
 
 
293 aa  167  2e-40  Thermotoga sp. RQ2  Bacteria  normal  0.0994152  n/a   
 
 
-
 
NC_009486  Tpet_0955  binding-protein-dependent transport systems inner membrane component  34.35 
 
 
293 aa  167  2e-40  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_3811  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
328 aa  167  2e-40  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0259  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
324 aa  164  2.0000000000000002e-39  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1096  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
315 aa  162  7e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.175054  normal 
 
 
-
 
NC_013169  Ksed_20480  carbohydrate ABC transporter membrane protein  34.73 
 
 
318 aa  161  1e-38  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0521728  normal  0.389193 
 
 
-
 
NC_007484  Noc_0281  ABC transporter, inner membrane subunit  37.76 
 
 
292 aa  161  2e-38  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3933  binding-protein-dependent transport systems inner membrane component  35.94 
 
 
320 aa  160  3e-38  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.292649  n/a   
 
 
-
 
NC_014158  Tpau_1200  binding-protein-dependent transport systems inner membrane component  35.5 
 
 
310 aa  158  1e-37  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5739  ABC transporter permease  33.22 
 
 
318 aa  158  1e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.184804 
 
 
-
 
NC_013131  Caci_2623  binding-protein-dependent transport systems inner membrane component  33.81 
 
 
330 aa  157  2e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0584633  normal 
 
 
-
 
NC_011886  Achl_0624  binding-protein-dependent transport systems inner membrane component  35.26 
 
 
345 aa  157  2e-37  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.65014 
 
 
-
 
NC_010524  Lcho_3328  binding-protein-dependent transport systems inner membrane component  29.51 
 
 
304 aa  157  2e-37  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013441  Gbro_1867  binding-protein-dependent transport systems inner membrane component  36.9 
 
 
388 aa  157  2e-37  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1819  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
293 aa  157  3e-37  Thermosipho melanesiensis BI429  Bacteria  normal  0.215175  n/a   
 
 
-
 
NC_009832  Spro_2525  binding-protein-dependent transport systems inner membrane component  30.29 
 
 
330 aa  156  5.0000000000000005e-37  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_1696  binding-protein-dependent transport systems inner membrane component  41.31 
 
 
291 aa  155  6e-37  Anaeromyxobacter sp. Fw109-5  Bacteria  hitchhiker  0.00180742  normal 
 
 
-
 
NC_008148  Rxyl_1990  binding-protein-dependent transport systems inner membrane component  35.56 
 
 
306 aa  155  7e-37  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.306567  n/a   
 
 
-
 
NC_009921  Franean1_4616  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
331 aa  155  7e-37  Frankia sp. EAN1pec  Bacteria  normal  0.338244  normal 
 
 
-
 
NC_008687  Pden_4441  binding-protein-dependent transport systems inner membrane component  32.05 
 
 
320 aa  155  8e-37  Paracoccus denitrificans PD1222  Bacteria  normal  0.0272526  normal 
 
 
-
 
NC_008025  Dgeo_0590  binding-protein-dependent transport systems inner membrane component  33.23 
 
 
315 aa  152  8e-36  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.273483  normal 
 
 
-
 
NC_013131  Caci_3596  binding-protein-dependent transport systems inner membrane component  31.21 
 
 
325 aa  152  8.999999999999999e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.295531  normal 
 
 
-
 
NC_010003  Pmob_0028  binding-protein-dependent transport systems inner membrane component  31.42 
 
 
300 aa  152  1e-35  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000378352  n/a   
 
 
-
 
NC_014212  Mesil_1016  binding-protein-dependent transport systems inner membrane component  36.05 
 
 
301 aa  150  2e-35  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11261  sugar-transport integral membrane protein ABC transporter sugA  35.95 
 
 
307 aa  150  3e-35  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00812399 
 
 
-
 
NC_008146  Mmcs_3982  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
308 aa  149  4e-35  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4056  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
308 aa  149  4e-35  Mycobacterium sp. KMS  Bacteria  normal  0.853442  normal  0.685254 
 
 
-
 
NC_009077  Mjls_3996  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
308 aa  149  6e-35  Mycobacterium sp. JLS  Bacteria  normal  0.172958  normal  0.378531 
 
 
-
 
NC_014210  Ndas_3354  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
299 aa  148  1.0000000000000001e-34  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0414  binding-protein-dependent transport systems inner membrane component  38.57 
 
 
345 aa  147  2.0000000000000003e-34  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0362  binding-protein-dependent transport systems inner membrane component  31.62 
 
 
312 aa  146  4.0000000000000006e-34  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.541424  n/a   
 
 
-
 
NC_013159  Svir_06500  carbohydrate ABC transporter membrane protein  34.6 
 
 
321 aa  145  8.000000000000001e-34  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1419  binding-protein-dependent transport systems inner membrane component  32.68 
 
 
314 aa  144  1e-33  Nocardioides sp. JS614  Bacteria  normal  0.906597  n/a   
 
 
-
 
NC_008786  Veis_0803  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
299 aa  145  1e-33  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.270687  normal 
 
 
-
 
NC_013093  Amir_0808  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
318 aa  144  2e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2089  binding-protein-dependent transport systems inner membrane component  38.36 
 
 
293 aa  143  3e-33  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.000000240561  normal  0.90976 
 
 
-
 
NC_011899  Hore_00790  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
262 aa  143  4e-33  Halothermothrix orenii H 168  Bacteria  normal  0.772214  n/a   
 
 
-
 
NC_010003  Pmob_0306  binding-protein-dependent transport systems inner membrane component  31.15 
 
 
294 aa  143  4e-33  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3145  binding-protein-dependent transport systems inner membrane component  34.57 
 
 
303 aa  143  5e-33  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.236219 
 
 
-
 
NC_013131  Caci_6903  binding-protein-dependent transport systems inner membrane component  31.71 
 
 
324 aa  142  5e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0156181  normal  0.0141251 
 
 
-
 
NC_009485  BBta_1755  ABC transporter permease  34.15 
 
 
312 aa  142  7e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.576454  normal  0.392142 
 
 
-
 
NC_010003  Pmob_1491  binding-protein-dependent transport systems inner membrane component  31.75 
 
 
289 aa  142  9.999999999999999e-33  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0761  binding-protein dependent transport system inner membrane protein  33 
 
 
320 aa  141  1.9999999999999998e-32  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0629996  normal  0.824676 
 
 
-
 
NC_013530  Xcel_2796  binding-protein-dependent transport systems inner membrane component  35.6 
 
 
355 aa  141  1.9999999999999998e-32  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2296  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
304 aa  140  1.9999999999999998e-32  Serratia proteamaculans 568  Bacteria  normal  0.44429  normal 
 
 
-
 
NC_013947  Snas_4645  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
299 aa  139  7e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00190071 
 
 
-
 
NC_008148  Rxyl_0068  binding-protein-dependent transport systems inner membrane component  34.07 
 
 
306 aa  139  8.999999999999999e-32  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0576  binding-protein-dependent transport systems inner membrane component  30.97 
 
 
319 aa  139  8.999999999999999e-32  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3554  binding-protein-dependent transport systems inner membrane component  35.61 
 
 
311 aa  138  1e-31  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0571  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
296 aa  138  1e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2455  binding-protein-dependent transport systems inner membrane component  32.44 
 
 
313 aa  138  1e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_19880  binding-protein-dependent transport systems inner membrane component  27.42 
 
 
323 aa  138  2e-31  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2427  binding-protein-dependent transport systems inner membrane component  29.93 
 
 
322 aa  137  2e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.535373  normal  0.626108 
 
 
-
 
NC_011886  Achl_0254  binding-protein-dependent transport systems inner membrane component  31.71 
 
 
320 aa  136  4e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009708  YpsIP31758_2171  carbohydrate ABC transporter permease  32.03 
 
 
280 aa  135  7.000000000000001e-31  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0580768  n/a   
 
 
-
 
NC_010625  Bphy_6370  binding-protein-dependent transport systems inner membrane component  28.06 
 
 
318 aa  135  7.000000000000001e-31  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1261  binding-protein dependent transport system inner membrane protein  31.16 
 
 
298 aa  135  8e-31  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.196832  n/a   
 
 
-
 
NC_008010  Dgeo_2820  binding-protein-dependent transport systems inner membrane component  34.59 
 
 
305 aa  135  8e-31  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_010627  Bphy_7450  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
316 aa  135  8e-31  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
309 aa  135  8e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4058  binding-protein-dependent transport systems inner membrane component  31.79 
 
 
309 aa  135  8e-31  Burkholderia phymatum STM815  Bacteria  normal  normal  0.801646 
 
 
-
 
NC_013202  Hmuk_0943  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
312 aa  135  9.999999999999999e-31  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.301949 
 
 
-
 
NC_013172  Bfae_01820  permease component of ABC-type sugar transporter  30.84 
 
 
312 aa  135  9.999999999999999e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2083  carbohydrate ABC transporter permease  33.87 
 
 
286 aa  134  1.9999999999999998e-30  Yersinia pestis Angola  Bacteria  normal  normal  0.0183943 
 
 
-
 
NC_009620  Smed_4397  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
297 aa  134  1.9999999999999998e-30  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.439093 
 
 
-
 
NC_011899  Hore_22990  binding-protein-dependent transport systems inner membrane component  30.59 
 
 
286 aa  134  3e-30  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000108841  n/a   
 
 
-
 
NC_009664  Krad_4016  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
338 aa  134  3e-30  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0789775 
 
 
-
 
NC_012848  Rleg_4864  binding-protein-dependent transport systems inner membrane component  29.28 
 
 
319 aa  133  3e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.243677  normal  0.263269 
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
319 aa  133  3.9999999999999996e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_2279  binding-protein-dependent transport systems inner membrane component  33.87 
 
 
286 aa  133  3.9999999999999996e-30  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5199  binding-protein-dependent transport systems inner membrane component  31.54 
 
 
312 aa  133  3.9999999999999996e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0867066 
 
 
-
 
NC_012848  Rleg_4941  binding-protein-dependent transport systems inner membrane component  33.1 
 
 
309 aa  133  5e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0953  binding-protein-dependent transport systems inner membrane component  34 
 
 
292 aa  132  6.999999999999999e-30  Rhodoferax ferrireducens T118  Bacteria  normal  0.568052  n/a   
 
 
-
 
NC_009620  Smed_4642  binding-protein-dependent transport systems inner membrane component  29.47 
 
 
294 aa  132  6.999999999999999e-30  Sinorhizobium medicae WSM419  Bacteria  normal  0.288658  normal  0.0756683 
 
 
-
 
NC_009972  Haur_4564  binding-protein-dependent transport systems inner membrane component  28.66 
 
 
345 aa  131  1.0000000000000001e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_1077  trehalose/maltose ABC transporter membrane protein  36.47 
 
 
288 aa  131  1.0000000000000001e-29  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3668  binding-protein-dependent transport systems inner membrane component  29.79 
 
 
299 aa  131  1.0000000000000001e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2349  binding-protein-dependent transport systems inner membrane component  33.96 
 
 
307 aa  131  1.0000000000000001e-29  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.552621 
 
 
-
 
NC_011366  Rleg2_5689  binding-protein-dependent transport systems inner membrane component  30.1 
 
 
294 aa  131  1.0000000000000001e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0888  sugar ABC transporter, permease protein  34.62 
 
 
320 aa  130  2.0000000000000002e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.392731  n/a   
 
 
-
 
NC_007494  RSP_3673  ABC sugar transporter, inner membrane subunit  33.12 
 
 
308 aa  131  2.0000000000000002e-29  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.246744  n/a   
 
 
-
 
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