| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_1088 |
|---|
| Symbol | |
|---|
| ID | 9167578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | + |
|---|
| Start bp | 1235363 |
|---|
| End bp | 1236229 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transporter inner membrane component |
|---|
| Protein accession | YP_003651703 |
|---|
| Protein GI | 296269071 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.616528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.00755847 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGTGGCGT TGCGCCGCAG GGCGGTGCCC TACCTGCTGA TCTCCCCGAC GGTCGCGCTG
ATCGCGGCCT TCCTCGCCTA CCCCATCGCC AGCGTGGCGT ACTACAGCCT CCAGCACCGC
AACCTGATCC GGCCGTGGGC GGACGGGTTC GCCGGGCTGG AGAACTTCCG CCGGATGCTC
TTCGAGGACG AGCTCTTCTG GCAGAGCCTC GTCTTCACGG CGAAGTGGGT GGTCACCGAG
GTGGGCCTGC AGTTCGTCCT CGGGCTCGCG CTCGCGCTCA TCGTCAACGA GACCTTCATC
GGACGAGGGC TCGCCCGGGC GCTCGTCTTC TCCCCGTGGG CCGTCTCCGG CGTGCTCACC
ACGGGAATCT GGATCCTGCT CTACACGCCC GGCACCGGGG TGCTGCGCTT CCTCGGCCAC
CCCGAGGCCG CCCCGCTCGG CGATCCCGAC GCGGTCTTCC CCGCCGTCGT CCTGGCCGAG
CTGTGGCGGG GCGTGCCGTT CTTCGCGATC CTGCTCCTCG CCGGCCTCCA GGGCATCCCC
GGCGAGCTCT ACGAGGCGGC CTCGGTGGAC GGGGCCGGGC GCATCCGCCG CTTCATCCAC
ATCACGCTGC CCCACCTGAA GGACGCGATC GTGCTCGCCA CGCTCCTGCG CTCCGTCTGG
GAGTTCAACA ACGTCGACCT GCTCTACACG CTCACCGGCG GCGGGCCCGC GCACCTCACC
ACAACGCTCC CGCTCTACGT GGCGCAGCGC GCCATCGACG CCAAGGACTT CGGGTACGGC
TCCGCGCTCA CCATGGCCGG CTTCGCGATC CTGCTCTTCT TCTCGATCCT CTACCTGAGG
GTCACCAGGT TCGGAGGTGA GCGGTGA
|
|---|
| Protein sequence | MVALRRRAVP YLLISPTVAL IAAFLAYPIA SVAYYSLQHR NLIRPWADGF AGLENFRRML
FEDELFWQSL VFTAKWVVTE VGLQFVLGLA LALIVNETFI GRGLARALVF SPWAVSGVLT
TGIWILLYTP GTGVLRFLGH PEAAPLGDPD AVFPAVVLAE LWRGVPFFAI LLLAGLQGIP
GELYEAASVD GAGRIRRFIH ITLPHLKDAI VLATLLRSVW EFNNVDLLYT LTGGGPAHLT
TTLPLYVAQR AIDAKDFGYG SALTMAGFAI LLFFSILYLR VTRFGGER
|
|---|
| |