Gene Rleg_5386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5386 
Symbol 
ID8007344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp798632 
End bp799483 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content62% 
IMG OID644822290 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002973550 
Protein GI241113715 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.992136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATA GCCGACCCTG GATCCCCTAT CTGCTGATCC TGCCATCCGT CGCCTTCCTG 
GCACTGCTGT TTGTCGTGCC GCTGGTGCAG ACGATCTGGC TGGCGGTGTC GGATAATGGC
GCGCCGTCGC TTGCAAATGC CGAGCGCATG GTCACCGACA TCAACTTCAC CCGCTCGGTG
AAAAATACCT TCCTGCTGAC GATCGCGGTC GTGCCGGTGC AGATCGCCCT TGCGCTGGCC
ATGGGCACGA TGGTCGCCAA GGTCGGCCGC GGGCGCGAGA CGATCCTGTG GATCTGGACG
ATCCCGCTCG GCATTTCCGA TCTCGCCGCC GGTCTCGTCT GGCTGTCGAT CCTGCAAAAT
ACCGGCTATC TGAATTCGCT GCTCTTCGGC CTCGGCATCA TCAGCCGGCA GGCAAGCTGG
CTCTCCTACC AGACGCCGGT CGCGCTCTTC ATCGCGATTG CAGTTGCCGA AATCTGGCGC
GGCACGGCAA TCGTCATGGT CATCATCGTT GCCGGCCTCA ACCAGGTGCC GAAGGAGTTC
AAGGAAGCCG CCGAAATCTT CGGCGCGGGT CCGTGGACGC GTTTCTGGCG CATCACCCTG
CCGCTGATCC GCCCCGCGCT GCAATCGGCG CTGATCCTGC GCACCGTGCT CGCCTTCGAG
GTCTTCGCGG TGGTCTATGC GCTCGGCGGG CGCAATTTTC CGGTCCTCGT CGGCGAGGCC
TACAACTGGC AAAACCAGAA CCAGAATTAC AGCGTCGCTG CTGCCTACGC GGTGCTGATC
ATGATCATCT CGCTTGCCGC CACGCTTATC TATCTCAAAG CCCTGAAGGT CGATCCGGAG
CGCCTGCCAT GA
 
Protein sequence
MTNSRPWIPY LLILPSVAFL ALLFVVPLVQ TIWLAVSDNG APSLANAERM VTDINFTRSV 
KNTFLLTIAV VPVQIALALA MGTMVAKVGR GRETILWIWT IPLGISDLAA GLVWLSILQN
TGYLNSLLFG LGIISRQASW LSYQTPVALF IAIAVAEIWR GTAIVMVIIV AGLNQVPKEF
KEAAEIFGAG PWTRFWRITL PLIRPALQSA LILRTVLAFE VFAVVYALGG RNFPVLVGEA
YNWQNQNQNY SVAAAYAVLI MIISLAATLI YLKALKVDPE RLP