More than 300 homologs were found in PanDaTox collection
for query gene Rleg_5386 on replicon NC_012848
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012848  Rleg_5386  binding-protein-dependent transport systems inner membrane component  100 
 
 
283 aa  553  1e-156  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.992136 
 
 
-
 
NC_014212  Mesil_0671  binding-protein-dependent transport systems inner membrane component  56.73 
 
 
281 aa  287  2e-76  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.279837 
 
 
-
 
NC_013947  Snas_0172  binding-protein-dependent transport systems inner membrane component  48.33 
 
 
293 aa  230  2e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_1535  binding-protein-dependent transport systems inner membrane component  40.59 
 
 
281 aa  203  3e-51  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.0000517697  n/a   
 
 
-
 
NC_010483  TRQ2_1584  binding-protein-dependent transport systems inner membrane component  40.37 
 
 
281 aa  201  9e-51  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_008698  Tpen_1549  binding-protein-dependent transport systems inner membrane component  38.83 
 
 
284 aa  174  9.999999999999999e-43  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_010320  Teth514_2196  binding-protein-dependent transport systems inner membrane component  32.36 
 
 
285 aa  137  2e-31  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00879782  n/a   
 
 
-
 
NC_009616  Tmel_1714  binding-protein-dependent transport systems inner membrane component  32 
 
 
289 aa  130  3e-29  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1704  binding-protein-dependent transport systems inner membrane component  32.61 
 
 
289 aa  125  9e-28  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_1977  binding-protein-dependent transport systems inner membrane component  31.51 
 
 
272 aa  120  1.9999999999999998e-26  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_009440  Msed_1288  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
274 aa  117  1.9999999999999998e-25  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  31.74 
 
 
296 aa  117  3e-25  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_014212  Mesil_1016  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
301 aa  115  1.0000000000000001e-24  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0305  sugar ABC transporter, permease protein  28.57 
 
 
325 aa  114  2.0000000000000002e-24  Brucella suis 1330  Bacteria  normal  0.0474821  n/a   
 
 
-
 
NC_013946  Mrub_2458  binding-protein-dependent transport systems inner membrane component  33.75 
 
 
299 aa  113  4.0000000000000004e-24  Meiothermus ruber DSM 1279  Bacteria  normal  0.610005  normal  0.71076 
 
 
-
 
NC_009504  BOV_A0280  sugar ABC transporter, permease protein  28.57 
 
 
325 aa  113  4.0000000000000004e-24  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0870  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
309 aa  112  7.000000000000001e-24  Nocardioides sp. JS614  Bacteria  normal  0.800905  n/a   
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
298 aa  112  9e-24  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0068  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
315 aa  111  1.0000000000000001e-23  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_1946  binding-protein-dependent transport systems inner membrane component  29.58 
 
 
320 aa  109  6e-23  Arthrobacter sp. FB24  Bacteria  normal  0.305055  n/a   
 
 
-
 
NC_012912  Dd1591_3241  binding-protein-dependent transport systems inner membrane component  33.76 
 
 
290 aa  108  1e-22  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_3811  binding-protein-dependent transport systems inner membrane component  29.21 
 
 
328 aa  108  1e-22  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  34.07 
 
 
299 aa  108  1e-22  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
NC_013161  Cyan8802_4298  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
294 aa  107  2e-22  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.200183 
 
 
-
 
NC_011726  PCC8801_4236  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
294 aa  107  2e-22  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009668  Oant_2941  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
320 aa  107  3e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.974377  n/a   
 
 
-
 
NC_009718  Fnod_0627  binding-protein-dependent transport systems inner membrane component  27.53 
 
 
294 aa  107  3e-22  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.0000000558297  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  28.37 
 
 
315 aa  106  4e-22  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6903  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
324 aa  106  4e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0156181  normal  0.0141251 
 
 
-
 
NC_011898  Ccel_2111  binding-protein-dependent transport systems inner membrane component  26.67 
 
 
306 aa  106  5e-22  Clostridium cellulolyticum H10  Bacteria  normal  0.157384  n/a   
 
 
-
 
NC_013525  Tter_0398  binding-protein-dependent transport systems inner membrane component  27.27 
 
 
312 aa  105  7e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_2015  binding-protein-dependent transport systems inner membrane component  29.1 
 
 
312 aa  105  8e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.514921  normal 
 
 
-
 
NC_009953  Sare_0748  binding-protein-dependent transport systems inner membrane component  29.39 
 
 
337 aa  104  1e-21  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00168888 
 
 
-
 
NC_011899  Hore_22990  binding-protein-dependent transport systems inner membrane component  28.67 
 
 
286 aa  105  1e-21  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000108841  n/a   
 
 
-
 
NC_012880  Dd703_3169  binding-protein-dependent transport systems inner membrane component  33.76 
 
 
290 aa  104  1e-21  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  30.07 
 
 
293 aa  103  2e-21  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3354  binding-protein-dependent transport systems inner membrane component  31.74 
 
 
299 aa  103  2e-21  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2496  binding-protein-dependent transport systems inner membrane component  27.76 
 
 
311 aa  103  3e-21  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
316 aa  103  3e-21  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_2309  binding-protein-dependent transport systems inner membrane component  31.09 
 
 
427 aa  103  3e-21  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00000129291  n/a   
 
 
-
 
NC_009664  Krad_4401  binding-protein-dependent transport systems inner membrane component  30.18 
 
 
316 aa  103  3e-21  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  31 
 
 
314 aa  103  4e-21  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  31 
 
 
314 aa  103  4e-21  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1990  binding-protein-dependent transport systems inner membrane component  26.95 
 
 
306 aa  102  5e-21  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.306567  n/a   
 
 
-
 
NC_012848  Rleg_5364  binding-protein-dependent transport systems inner membrane component  28.47 
 
 
305 aa  100  2e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.402925 
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  29.33 
 
 
299 aa  101  2e-20  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_012850  Rleg_3909  binding-protein-dependent transport systems inner membrane component  27.74 
 
 
305 aa  100  2e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.172275 
 
 
-
 
NC_007511  Bcep18194_B0940  ABC sugar transporter, inner membrane subunit  30.43 
 
 
289 aa  100  3e-20  Burkholderia sp. 383  Bacteria  normal  normal  0.298922 
 
 
-
 
NC_008391  Bamb_4157  binding-protein-dependent transport systems inner membrane component  30 
 
 
289 aa  99.8  4e-20  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  29.01 
 
 
299 aa  99.8  4e-20  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2054  binding-protein-dependent transport systems inner membrane component  28.52 
 
 
293 aa  99  7e-20  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3593  binding-protein-dependent transport systems inner membrane component  30 
 
 
289 aa  99.4  7e-20  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5509  binding-protein-dependent transport systems inner membrane component  30 
 
 
289 aa  99.4  7e-20  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.438366  normal 
 
 
-
 
NC_008543  Bcen2424_4774  binding-protein-dependent transport systems inner membrane component  30 
 
 
289 aa  99.4  7e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.808754 
 
 
-
 
NC_011369  Rleg2_3621  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
305 aa  99  8e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.980812  normal 
 
 
-
 
NC_010320  Teth514_0754  binding-protein-dependent transport systems inner membrane component  32 
 
 
324 aa  99  8e-20  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000204062  n/a   
 
 
-
 
NC_013411  GYMC61_2958  binding-protein-dependent transport systems inner membrane component  28.98 
 
 
435 aa  99  8e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011368  Rleg2_5492  binding-protein-dependent transport systems inner membrane component  27.81 
 
 
328 aa  98.6  9e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.511246  normal  0.17987 
 
 
-
 
NC_011368  Rleg2_4759  binding-protein-dependent transport systems inner membrane component  28.11 
 
 
305 aa  98.2  1e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.536489  normal 
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  25.81 
 
 
295 aa  98.2  1e-19  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  27.4 
 
 
288 aa  98.2  1e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_010552  BamMC406_4681  binding-protein-dependent transport systems inner membrane component  29.57 
 
 
289 aa  97.8  2e-19  Burkholderia ambifaria MC40-6  Bacteria  normal  0.205446  normal 
 
 
-
 
NC_014248  Aazo_4983  binding-protein-dependent transporter inner membrane protein  27.86 
 
 
310 aa  97.8  2e-19  'Nostoc azollae' 0708  Bacteria  normal  0.300856  n/a   
 
 
-
 
NC_009972  Haur_4564  binding-protein-dependent transport systems inner membrane component  26.19 
 
 
345 aa  97.8  2e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  31.77 
 
 
307 aa  97.8  2e-19  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_013595  Sros_3074  sugar ABC transporter permease protein  27.86 
 
 
307 aa  97.4  2e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.146884 
 
 
-
 
NC_013205  Aaci_2236  binding-protein-dependent transport systems inner membrane component  28.36 
 
 
315 aa  97.8  2e-19  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_19880  binding-protein-dependent transport systems inner membrane component  26.01 
 
 
323 aa  97.4  2e-19  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  26.59 
 
 
300 aa  97.1  3e-19  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2145  binding-protein-dependent transport systems inner membrane component  27.78 
 
 
362 aa  97.1  3e-19  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_4929  binding-protein-dependent transport systems inner membrane component  28.52 
 
 
311 aa  97.1  3e-19  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.155715  normal 
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
305 aa  97.1  3e-19  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_4036  binding-protein-dependent transport systems inner membrane component  31.9 
 
 
291 aa  96.7  4e-19  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0474  binding-protein-dependent transport systems inner membrane component  28.39 
 
 
291 aa  96.7  4e-19  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3284  maltose-binding periplasmic protein  30.99 
 
 
293 aa  96.7  4e-19  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0588261  normal 
 
 
-
 
NC_009486  Tpet_0955  binding-protein-dependent transport systems inner membrane component  28.38 
 
 
293 aa  96.7  4e-19  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0971  binding-protein-dependent transport systems inner membrane component  28.38 
 
 
293 aa  96.7  4e-19  Thermotoga sp. RQ2  Bacteria  normal  0.0994152  n/a   
 
 
-
 
NC_009664  Krad_1114  binding-protein-dependent transport systems inner membrane component  28.29 
 
 
319 aa  96.7  4e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.32149  normal  0.356013 
 
 
-
 
NC_011830  Dhaf_2160  binding-protein-dependent transport systems inner membrane component  28.91 
 
 
292 aa  96.3  5e-19  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.07173  n/a   
 
 
-
 
NC_013131  Caci_2623  binding-protein-dependent transport systems inner membrane component  28.45 
 
 
330 aa  96.3  6e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0584633  normal 
 
 
-
 
NC_011368  Rleg2_5475  binding-protein-dependent transport systems inner membrane component  29.68 
 
 
312 aa  95.9  6e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.44322 
 
 
-
 
NC_010816  BLD_1875  MalF-type ABC sugar transport systems permease component  28.27 
 
 
350 aa  95.5  8e-19  Bifidobacterium longum DJO10A  Bacteria  normal  0.0432685  n/a   
 
 
-
 
NC_012669  Bcav_2702  binding-protein-dependent transport systems inner membrane component  27.82 
 
 
299 aa  95.5  8e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.573437  normal  0.482713 
 
 
-
 
NC_010003  Pmob_0143  binding-protein-dependent transport systems inner membrane component  31.44 
 
 
402 aa  95.5  9e-19  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4638  binding-protein dependent transport system inner membrane protein  29.71 
 
 
308 aa  95.5  9e-19  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.000000461706  normal  0.23331 
 
 
-
 
NC_007604  Synpcc7942_0949  permease protein of sugar ABC transporter  29.44 
 
 
292 aa  95.1  1e-18  Synechococcus elongatus PCC 7942  Bacteria  normal  0.688345  normal 
 
 
-
 
NC_013131  Caci_3596  binding-protein-dependent transport systems inner membrane component  25.58 
 
 
325 aa  95.1  1e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.295531  normal 
 
 
-
 
NC_013595  Sros_7938  ABC transporter (permease)  29.96 
 
 
295 aa  94.7  1e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.520551  normal  0.356358 
 
 
-
 
NC_012854  Rleg_6527  binding-protein-dependent transport systems inner membrane component  28.97 
 
 
307 aa  94.7  1e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0292278 
 
 
-
 
NC_008541  Arth_3686  binding-protein-dependent transport systems inner membrane component  27.78 
 
 
310 aa  94.4  2e-18  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3074  binding-protein-dependent transport systems inner membrane component  29.83 
 
 
314 aa  94.4  2e-18  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013521  Sked_03710  carbohydrate ABC transporter membrane protein  30.94 
 
 
332 aa  94  2e-18  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.899537 
 
 
-
 
NC_011831  Cagg_0405  binding-protein-dependent transport systems inner membrane component  30.67 
 
 
406 aa  94  3e-18  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.63982  normal 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  30.36 
 
 
294 aa  93.6  3e-18  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_013530  Xcel_2115  binding-protein-dependent transport systems inner membrane component  30.56 
 
 
319 aa  93.6  3e-18  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.438975  n/a   
 
 
-
 
NC_009380  Strop_0804  binding-protein-dependent transport systems inner membrane component  28.85 
 
 
337 aa  93.6  3e-18  Salinispora tropica CNB-440  Bacteria  normal  0.606963  normal 
 
 
-
 
NC_009620  Smed_4160  binding-protein-dependent transport systems inner membrane component  29.83 
 
 
305 aa  94  3e-18  Sinorhizobium medicae WSM419  Bacteria  normal  0.255761  normal  0.778964 
 
 
-
 
NC_011992  Dtpsy_0790  binding-protein-dependent transport systems inner membrane component  25.78 
 
 
293 aa  93.6  3e-18  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3289  ABC glycerol-3-phosphate transporter, inner membrane subunit UgpA  29.93 
 
 
293 aa  93.2  4e-18  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_00790  binding-protein-dependent transport systems inner membrane component  27.69 
 
 
262 aa  93.2  4e-18  Halothermothrix orenii H 168  Bacteria  normal  0.772214  n/a   
 
 
-
 
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