More than 300 homologs were found in PanDaTox collection
for query gene Tmel_1704 on replicon NC_009616
Organism: Thermosipho melanesiensis BI429



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009616  Tmel_1704  binding-protein-dependent transport systems inner membrane component  100 
 
 
289 aa  566  1e-160  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1714  binding-protein-dependent transport systems inner membrane component  87.54 
 
 
289 aa  508  1e-143  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2196  binding-protein-dependent transport systems inner membrane component  34.67 
 
 
285 aa  151  1e-35  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00879782  n/a   
 
 
-
 
NC_010483  TRQ2_1584  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
281 aa  140  1.9999999999999998e-32  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1535  binding-protein-dependent transport systems inner membrane component  31.87 
 
 
281 aa  137  2e-31  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.0000517697  n/a   
 
 
-
 
NC_010003  Pmob_0028  binding-protein-dependent transport systems inner membrane component  32.75 
 
 
300 aa  134  1.9999999999999998e-30  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000378352  n/a   
 
 
-
 
NC_012848  Rleg_5386  binding-protein-dependent transport systems inner membrane component  32.61 
 
 
283 aa  134  1.9999999999999998e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.992136 
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  37.07 
 
 
307 aa  128  9.000000000000001e-29  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_013947  Snas_0172  binding-protein-dependent transport systems inner membrane component  32.76 
 
 
293 aa  124  2e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1990  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
306 aa  123  3e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.306567  n/a   
 
 
-
 
NC_010524  Lcho_3328  binding-protein-dependent transport systems inner membrane component  30.08 
 
 
304 aa  121  9.999999999999999e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009668  Oant_2941  binding-protein-dependent transport systems inner membrane component  30.58 
 
 
320 aa  119  3.9999999999999996e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.974377  n/a   
 
 
-
 
NC_009718  Fnod_0449  binding-protein-dependent transport systems inner membrane component  31.74 
 
 
295 aa  119  7.999999999999999e-26  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.982578  n/a   
 
 
-
 
NC_013411  GYMC61_2958  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
435 aa  117  1.9999999999999998e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008698  Tpen_1549  binding-protein-dependent transport systems inner membrane component  28.77 
 
 
284 aa  117  1.9999999999999998e-25  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  32.35 
 
 
296 aa  117  3e-25  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_007963  Csal_0259  binding-protein-dependent transport systems inner membrane component  29.75 
 
 
324 aa  117  3e-25  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0024  binding-protein-dependent transport systems inner membrane component  29.23 
 
 
320 aa  116  3.9999999999999997e-25  Marinomonas sp. MWYL1  Bacteria  normal  0.227719  normal  0.433481 
 
 
-
 
NC_014212  Mesil_0671  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
281 aa  116  5e-25  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.279837 
 
 
-
 
NC_010483  TRQ2_0971  binding-protein-dependent transport systems inner membrane component  27.93 
 
 
293 aa  114  1.0000000000000001e-24  Thermotoga sp. RQ2  Bacteria  normal  0.0994152  n/a   
 
 
-
 
NC_013525  Tter_0398  binding-protein-dependent transport systems inner membrane component  32.37 
 
 
312 aa  115  1.0000000000000001e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009486  Tpet_0955  binding-protein-dependent transport systems inner membrane component  27.93 
 
 
293 aa  114  1.0000000000000001e-24  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3354  binding-protein-dependent transport systems inner membrane component  30.63 
 
 
299 aa  112  5e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3145  binding-protein-dependent transport systems inner membrane component  30.7 
 
 
303 aa  112  9e-24  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.236219 
 
 
-
 
NC_013131  Caci_3588  binding-protein-dependent transport systems inner membrane component  28.87 
 
 
338 aa  112  1.0000000000000001e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.786552  normal 
 
 
-
 
NC_009504  BOV_A0280  sugar ABC transporter, permease protein  29.9 
 
 
325 aa  111  1.0000000000000001e-23  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0627  binding-protein-dependent transport systems inner membrane component  27.74 
 
 
294 aa  110  2.0000000000000002e-23  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.0000000558297  n/a   
 
 
-
 
NC_009620  Smed_3811  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
328 aa  111  2.0000000000000002e-23  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2623  binding-protein-dependent transport systems inner membrane component  32.36 
 
 
330 aa  110  3e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0584633  normal 
 
 
-
 
NC_004311  BRA0305  sugar ABC transporter, permease protein  29.9 
 
 
325 aa  110  3e-23  Brucella suis 1330  Bacteria  normal  0.0474821  n/a   
 
 
-
 
NC_008699  Noca_0870  binding-protein-dependent transport systems inner membrane component  29.78 
 
 
309 aa  110  3e-23  Nocardioides sp. JS614  Bacteria  normal  0.800905  n/a   
 
 
-
 
NC_008686  Pden_1048  binding-protein-dependent transport systems inner membrane component  32.71 
 
 
308 aa  109  4.0000000000000004e-23  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2455  binding-protein-dependent transport systems inner membrane component  31.9 
 
 
313 aa  108  7.000000000000001e-23  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0306  binding-protein-dependent transport systems inner membrane component  32.64 
 
 
294 aa  108  8.000000000000001e-23  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1819  binding-protein-dependent transport systems inner membrane component  31.01 
 
 
293 aa  108  1e-22  Thermosipho melanesiensis BI429  Bacteria  normal  0.215175  n/a   
 
 
-
 
NC_008541  Arth_3686  binding-protein-dependent transport systems inner membrane component  32.93 
 
 
310 aa  107  2e-22  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  34.06 
 
 
320 aa  106  4e-22  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2089  binding-protein-dependent transport systems inner membrane component  33.85 
 
 
293 aa  106  5e-22  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.000000240561  normal  0.90976 
 
 
-
 
NC_014150  Bmur_1089  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
290 aa  106  5e-22  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000136101  n/a   
 
 
-
 
NC_011368  Rleg2_5492  binding-protein-dependent transport systems inner membrane component  30.95 
 
 
328 aa  106  5e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.511246  normal  0.17987 
 
 
-
 
NC_009636  Smed_0187  binding-protein-dependent transport systems inner membrane component  33.79 
 
 
307 aa  105  6e-22  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3596  binding-protein-dependent transport systems inner membrane component  30.34 
 
 
325 aa  105  7e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.295531  normal 
 
 
-
 
NC_011899  Hore_20860  binding-protein-dependent transport systems inner membrane component  36.96 
 
 
357 aa  105  1e-21  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2525  binding-protein-dependent transport systems inner membrane component  28.16 
 
 
330 aa  105  1e-21  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3558  binding-protein-dependent transport systems inner membrane component  32.73 
 
 
295 aa  103  2e-21  Chelativorans sp. BNC1  Bacteria  normal  0.727517  n/a   
 
 
-
 
NC_008687  Pden_4441  binding-protein-dependent transport systems inner membrane component  34.05 
 
 
320 aa  104  2e-21  Paracoccus denitrificans PD1222  Bacteria  normal  0.0272526  normal 
 
 
-
 
NC_011899  Hore_19880  binding-protein-dependent transport systems inner membrane component  28.98 
 
 
323 aa  103  3e-21  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4016  binding-protein-dependent transport systems inner membrane component  28.86 
 
 
338 aa  103  4e-21  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0789775 
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  31 
 
 
314 aa  103  5e-21  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  31 
 
 
314 aa  103  5e-21  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0953  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
292 aa  102  5e-21  Rhodoferax ferrireducens T118  Bacteria  normal  0.568052  n/a   
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  29.49 
 
 
328 aa  102  6e-21  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  29.07 
 
 
316 aa  102  6e-21  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  31.36 
 
 
299 aa  102  6e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_011830  Dhaf_2160  binding-protein-dependent transport systems inner membrane component  30.28 
 
 
292 aa  102  7e-21  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.07173  n/a   
 
 
-
 
NC_010816  BLD_1875  MalF-type ABC sugar transport systems permease component  29.58 
 
 
350 aa  102  8e-21  Bifidobacterium longum DJO10A  Bacteria  normal  0.0432685  n/a   
 
 
-
 
NC_013521  Sked_02940  carbohydrate ABC transporter membrane protein  30.6 
 
 
318 aa  102  8e-21  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_0253  binding-protein-dependent transport systems inner membrane component  29.83 
 
 
293 aa  101  1e-20  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2796  binding-protein-dependent transport systems inner membrane component  30.08 
 
 
355 aa  101  1e-20  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0474  binding-protein-dependent transport systems inner membrane component  29.35 
 
 
291 aa  101  1e-20  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0068  binding-protein-dependent transport systems inner membrane component  28 
 
 
315 aa  101  2e-20  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4663  binding-protein-dependent transport systems inner membrane component  30.66 
 
 
299 aa  99.4  6e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.456499 
 
 
-
 
NC_014151  Cfla_3051  binding-protein-dependent transport systems inner membrane component  32.23 
 
 
338 aa  99.4  7e-20  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.335951  normal  0.466485 
 
 
-
 
NC_008699  Noca_3682  binding-protein-dependent transport systems inner membrane component  36.46 
 
 
283 aa  99  8e-20  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_22990  binding-protein-dependent transport systems inner membrane component  33.64 
 
 
286 aa  99  8e-20  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000108841  n/a   
 
 
-
 
NC_007005  Psyr_0761  binding-protein dependent transport system inner membrane protein  30.86 
 
 
320 aa  98.2  1e-19  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0629996  normal  0.824676 
 
 
-
 
NC_008261  CPF_1114  sugar ABC transporter, permease protein  28.32 
 
 
301 aa  98.2  1e-19  Clostridium perfringens ATCC 13124  Bacteria  normal  0.212611  n/a   
 
 
-
 
NC_013131  Caci_6903  binding-protein-dependent transport systems inner membrane component  28.88 
 
 
324 aa  98.6  1e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0156181  normal  0.0141251 
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  30.08 
 
 
315 aa  98.2  2e-19  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  29.18 
 
 
319 aa  97.8  2e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4915  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
300 aa  97.8  2e-19  Sinorhizobium medicae WSM419  Bacteria  normal  0.279079  normal  0.466467 
 
 
-
 
NC_012034  Athe_2309  binding-protein-dependent transport systems inner membrane component  30.16 
 
 
427 aa  97.8  2e-19  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00000129291  n/a   
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  28.26 
 
 
294 aa  97.1  3e-19  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_007802  Jann_1389  binding-protein-dependent transport systems inner membrane component  29.79 
 
 
300 aa  96.7  4e-19  Jannaschia sp. CCS1  Bacteria  normal  0.0114019  normal  0.0892858 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  29.97 
 
 
318 aa  96.7  4e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_008578  Acel_2048  binding-protein-dependent transport systems inner membrane component  27.14 
 
 
332 aa  96.7  4e-19  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
318 aa  96.3  5e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_009664  Krad_4401  binding-protein-dependent transport systems inner membrane component  30.34 
 
 
316 aa  96.3  5e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011371  Rleg2_6391  binding-protein-dependent transport systems inner membrane component  32.45 
 
 
372 aa  96.3  5e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.452199  normal 
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  29.74 
 
 
313 aa  96.7  5e-19  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_009832  Spro_2296  binding-protein-dependent transport systems inner membrane component  30.21 
 
 
304 aa  96.3  6e-19  Serratia proteamaculans 568  Bacteria  normal  0.44429  normal 
 
 
-
 
NC_009486  Tpet_0645  binding-protein-dependent transport systems inner membrane component  28.8 
 
 
309 aa  95.9  6e-19  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000282921  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
316 aa  96.3  6e-19  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  28.96 
 
 
295 aa  96.3  6e-19  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3349  binding-protein-dependent transport systems inner membrane component  27.87 
 
 
291 aa  95.9  7e-19  Variovorax paradoxus S110  Bacteria  normal  0.230089  n/a   
 
 
-
 
NC_010552  BamMC406_4681  binding-protein-dependent transport systems inner membrane component  29.6 
 
 
289 aa  95.9  7e-19  Burkholderia ambifaria MC40-6  Bacteria  normal  0.205446  normal 
 
 
-
 
NC_008025  Dgeo_0590  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
315 aa  95.5  9e-19  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.273483  normal 
 
 
-
 
NC_008010  Dgeo_2695  binding-protein-dependent transport systems inner membrane component  29.15 
 
 
309 aa  95.1  1e-18  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.179346  n/a   
 
 
-
 
NC_009338  Mflv_3776  binding-protein-dependent transport systems inner membrane component  27.92 
 
 
286 aa  95.1  1e-18  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.771132  normal  0.363599 
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  26.79 
 
 
330 aa  95.1  1e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_010483  TRQ2_0670  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
294 aa  94.4  2e-18  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5475  binding-protein-dependent transport systems inner membrane component  30.33 
 
 
312 aa  94.4  2e-18  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.44322 
 
 
-
 
NC_007604  Synpcc7942_0949  permease protein of sugar ABC transporter  33.33 
 
 
292 aa  94.4  2e-18  Synechococcus elongatus PCC 7942  Bacteria  normal  0.688345  normal 
 
 
-
 
NC_012669  Bcav_3676  binding-protein-dependent transport systems inner membrane component  27.87 
 
 
309 aa  94.4  2e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0419  ABC sugar transporter, inner membrane subunit  29.69 
 
 
296 aa  94  2e-18  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_4929  binding-protein-dependent transport systems inner membrane component  27.24 
 
 
311 aa  94.7  2e-18  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.155715  normal 
 
 
-
 
NC_013595  Sros_5739  ABC transporter permease  28.97 
 
 
318 aa  94.4  2e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.184804 
 
 
-
 
NC_008541  Arth_0049  binding-protein-dependent transport systems inner membrane component  29.2 
 
 
295 aa  94  2e-18  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_2623  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
287 aa  94  2e-18  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
292 aa  94.7  2e-18  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
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