| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1535 |
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| Symbol | |
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| ID | 5170710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1523588 |
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| End bp | 1524433 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640564062 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001245119 |
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| Protein GI | 148270659 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000517697 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGGGA AATGGATTTC TTTTCTTTTG ATCCTTCCAG CCGTTCTTTA TCTCGTTTTG
TTGATGGGAT ATCCTCTCTT CGAAACGTTC AGACTCGCTT TTACAAGCGA TGAAGGTTTT
CTTGGAAATT TCAAGCGCCT TGTGGAGAGT GGTGGTTTCT GGAACGCCAT GAAAAACACC
CTTCTTCTCA CAGCGGTGAT CGTCCCCCTT CAACTCATAC TCGCACTGGG ACTCGCTCTT
TTTGTCAATC AGAGATTCAG AGGTTACACG ACGGTACTTT ACTTCATAGC GATTCCATTG
GCTCTGAGTG ATGTTACAGC GGCGCTCATG AGTTACACTA TATTTTCTCC GAACGGGTAT
CTCAACAAAA TTTTCATGAA TTTGCATCTG ATAGAAAGAC CCATCTATTT CTTTGGATAC
ATGTTCAAGG CAAGAGAATT CTGGGTGATC GTCCTCACGG AGGTGTGGAG GGCTACTCCC
CTTGTTTTCA TCATTCTACT GGCGGGTCTT CAGTCGATAA ACAAAGAGTA TCTGGAAGCG
GCAGATCTCT TCGGTTTTTC AAGATGGAAG AAATTCACAA AGATCATACT TCCACTCCTG
AAACCATCGA TCATGTCAGC GCTCCTTCTG AGAACTCTCT TCGCGTTCCA GATATTCGGT
GTGGTGTGGC TTCTTGCGGG AAGGGATATT CCCGTTCTCG CTGGTGAGAC CTACTACTGG
TACACCTTCA TGAACGACCC GAAGATGGCC AGTGCGTACG CTCTCGTGAT CGCCCTTGTC
ACCATCGTGG TCAGCTGGTT CTACATCACC TTCCTCAGTG CAAAACATCT GGAGGGGGCA
CGATGA
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| Protein sequence | MRGKWISFLL ILPAVLYLVL LMGYPLFETF RLAFTSDEGF LGNFKRLVES GGFWNAMKNT
LLLTAVIVPL QLILALGLAL FVNQRFRGYT TVLYFIAIPL ALSDVTAALM SYTIFSPNGY
LNKIFMNLHL IERPIYFFGY MFKAREFWVI VLTEVWRATP LVFIILLAGL QSINKEYLEA
ADLFGFSRWK KFTKIILPLL KPSIMSALLL RTLFAFQIFG VVWLLAGRDI PVLAGETYYW
YTFMNDPKMA SAYALVIALV TIVVSWFYIT FLSAKHLEGA R
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