| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4915 |
|---|
| Symbol | |
|---|
| ID | 5319127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 1425287 |
|---|
| End bp | 1426189 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640776699 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001313631 |
|---|
| Protein GI | 150377035 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.279079 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.466467 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGAA TTTTATCCAG CATCACGGAT GGCAGGGGCT TTGATGTCGG CCTCGTGAGC
TTGCCGCTCG CCTTCCTGTT CGTTCTTTCC GGGCTGCCGC TCGTCTACAA CGTCGTGATG
AGCTTCCAGG AGGTCGACAT GTTCAGCCTC GGCAGCTTTT CGCGGCCGTT CGTGGGCTTC
AAGAATTATA TCGACCTTTT CGGCCAGCCT GAAACCTGGC CCATTCTCCT CAATACCGCC
ATCTTCGTGA CGGCCTCGAT CGCGGGCCAG TTTCTTATTG GCTTCGGTCT TGCGCTCTTC
TTCTGGGTCA GTTTCCCCGG TGCGTCCTGG CTTCGCGGCC TCTTCCTCGT CTCCTGGGTC
ATGCCCGGCC TCGTCGTGGG CGCCATCTGG AACTGGATTC TGTCGGGCGA CTTCGGCGTA
CTCAACTTTC TGCTGCGCGA AACGGGTGTG ATCTCCGGCA ACATCTTCTG GCGATCGGAT
CCGAGCCATT CTCTTTGGGC GGTCATCATC GCCAATATCT GGTTGGGCAC GTCGTTCAAC
ATGATCCTGC TTTCGGTCGG CCTTTCAGGC ATTCCGAAGG ACCTCTACGA GGCGGCCGAA
CTGGATGGTG CCAACGCGTT TCAACGCTTC TGGACGATTA CCCTGCCGAT GATGCGTTCG
ACGATCGGCG CCATCGTCGC GCTCGGACTC ATCTTCACGC TGCAGCAATT CGATCTCTTC
GCCGCAATCA CGTCCGGAGG GCCGAACAAT ACGTCCAATG TCACGCAATA CTGGGCCTGG
GACCTTTCCT TCCGCCAGTA TGATTTTGCC AAGGGTGCGA CGATCTCGGT GATCATGATC
GTCTTCGTGA TGTTCGCCTC CGTCGTTTAT GTCCGCTCAA CGCGCCATGA GGTCAGAGGA
TGA
|
|---|
| Protein sequence | MKRILSSITD GRGFDVGLVS LPLAFLFVLS GLPLVYNVVM SFQEVDMFSL GSFSRPFVGF
KNYIDLFGQP ETWPILLNTA IFVTASIAGQ FLIGFGLALF FWVSFPGASW LRGLFLVSWV
MPGLVVGAIW NWILSGDFGV LNFLLRETGV ISGNIFWRSD PSHSLWAVII ANIWLGTSFN
MILLSVGLSG IPKDLYEAAE LDGANAFQRF WTITLPMMRS TIGAIVALGL IFTLQQFDLF
AAITSGGPNN TSNVTQYWAW DLSFRQYDFA KGATISVIMI VFVMFASVVY VRSTRHEVRG
|
|---|
| |