| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3328 |
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| Symbol | |
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| ID | 6163715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3704619 |
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| End bp | 3705533 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641666103 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001792351 |
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| Protein GI | 171060002 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACC GCACTCGCAT TGCCTGGACC TTCCTGGCGC CGATGCTGAT CCTGATGGTC
CTGGTGGCGG GTTGGCCGCT CGGGCGTTCG ATCTGGTTCA GCTTCACTGA AACCAACATC
AACGACATCA CGGCCAGCTC CTTCGTGGGC TTTGGCAACT ACTTCGGCGA ATTCGGCCTG
TTCGCGAACC CGAACTACGT CGAGGGCTTC TGGGCCAGCG ACTGGGGCAT CTCGATCCTG
AACACCTACA AGTTCTCGAT CGTCTCGGTG ATCCTCGAGA CCCTGTGCGG CCTGGGCGTG
GCGATGCTGC TGAACCAGGA GTTCAAGGGT CGCGCGTTGG TGCGCACCGC GGTGCTGGTG
CCCTGGGCCA TCCCGACCAT CGTGTCGGCC AAGATGTGGG GCTGGATGCT GCATGACCAG
TTCGGCCTGA TCAACCAGAT CCTGCTCGAC TGGGGAATCA TCTCCGCCAA GATCGCCTTC
ACCGCGGACC CGGACTATGC GCTGTGGACG GTGGTGGCGG TCGACGTCTG GAAGACCACG
CCCTTCATGG CCCTGCTGAT CCTCGCGGGC CTGCAGACGC TGCCCAAGGA CTGCTACGAG
GCCGCGCGTG TCGACGGCGT GCATCCGCTG CGCGTGTTCT GGAAGGTGAC GCTGCCGCTG
ATCAAGCACC CGCTGATGGT GGCGGTGATC TTCCGGCTGC TCGACGCCCT GCGCATCTTC
GACCTGATCT TCGTGCTGAC CTCCAACAGC GGCAGCACCA TCAGCATGTC GGGCTTCGTG
CGCCGCGAGA TGGTCGACAA CGGCAACCTG GGTTACGGCT CGGCGGCGTC GACCTCGCTG
ACGATCATCA TCTTCCTGTC GGCGCTGCTG TTCATGCGTG CGGCACGCGT CAAGCTCAAC
GAGGAGTCCA ACTGA
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| Protein sequence | MKNRTRIAWT FLAPMLILMV LVAGWPLGRS IWFSFTETNI NDITASSFVG FGNYFGEFGL
FANPNYVEGF WASDWGISIL NTYKFSIVSV ILETLCGLGV AMLLNQEFKG RALVRTAVLV
PWAIPTIVSA KMWGWMLHDQ FGLINQILLD WGIISAKIAF TADPDYALWT VVAVDVWKTT
PFMALLILAG LQTLPKDCYE AARVDGVHPL RVFWKVTLPL IKHPLMVAVI FRLLDALRIF
DLIFVLTSNS GSTISMSGFV RREMVDNGNL GYGSAASTSL TIIIFLSALL FMRAARVKLN
EESN
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