Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4564 |
Symbol | |
ID | 5736409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 5841707 |
End bp | 5842744 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641281726 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001547323 |
Protein GI | 159901076 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCGG CAGAAAGTAG CGTCGAGCGT GCTAGTGATA GCGCCATCCC ACGACCTTCG TGGTGGGCAC GCACCAGAAC CTCGCGAACA GCCTATACGT ATCTTTTTCC CGCTCTGATC GTGATGTCGA TCATCACGTT CTATCCCATT CTCTACCAAT TTTGGATGTC GCTAACCGAC TTTGGCCCAT CCAGCATCAA CCCTCTTGCC AAAAACTATA CGCCACCCAA ATATGTGGGC TTTGAAAACT ATCAATTAAT TTTGCAAGAT AAGTTGGCTA CCAAAAATGC CGACTTAGCC AGCTTCAAAT TCTGGCGCAC CTTGGGCTTC AACATTTGGT GGACATTCTC GAATGTGATT TTTCACGTTT CACTGGGGAT CGTCATCGCC GTGATGTTGA ACGTCGAGGG TTTGTGGTTT AAAAAGATCT ATCGCGCAAT TTATATCTTA CCCATGGTGC TGCCACAGTT GGTTATTGCC ACGATTTGGC GCAATATGTT CGATGGGCAA TATGGCGCGA TCAATTTGAT GTTGAAGATC TTTCTTGGCC CAGCCTTCCC CAGCGGTGGG ATTGATTGGC TCCAGCGGAT TGAGCCAGTC GCCTTTGGCT TACCACTTTC GTACTTTGCC ATGTTGATCG CCAATATTTG GCTGGGCTGG CCGTTTATGA CGATTGTGGC CACTGGTGCA CTCCAAAGTA TCCCCAAAGA ATTGTATGAG GCGGCCTCGA TCGATGGCGC AACTGGCTGG AATAAATTCT GGACAATTAC CCTGCCATTG CTCCGCCCCG CCATGGTTCC GGCAACCATT TTGGGGATTA TCCAAACCTT CAATCTGTTC CATGTGATTT ATTTTATCAG CGGCGGCGGC CCACTCGGCC AAACCGAAAT CTTGGTGACC CAAGCCTATA AGCTGATCAA TAATAACTCC TTGTTTGGGA TTGGGGCCGC ATTTAGCGTC TTTATCTTTA TTATTCTTGG CTGTATCTCG GCAATTACCG CCAGAATTTC ACGAGTAGCG GAGTCATACG ATGGCTAA
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Protein sequence | MASAESSVER ASDSAIPRPS WWARTRTSRT AYTYLFPALI VMSIITFYPI LYQFWMSLTD FGPSSINPLA KNYTPPKYVG FENYQLILQD KLATKNADLA SFKFWRTLGF NIWWTFSNVI FHVSLGIVIA VMLNVEGLWF KKIYRAIYIL PMVLPQLVIA TIWRNMFDGQ YGAINLMLKI FLGPAFPSGG IDWLQRIEPV AFGLPLSYFA MLIANIWLGW PFMTIVATGA LQSIPKELYE AASIDGATGW NKFWTITLPL LRPAMVPATI LGIIQTFNLF HVIYFISGGG PLGQTEILVT QAYKLINNNS LFGIGAAFSV FIFIILGCIS AITARISRVA ESYDG
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