| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5073 |
|---|
| Symbol | |
|---|
| ID | 9248962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | - |
|---|
| Start bp | 217282 |
|---|
| End bp | 218274 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003682960 |
|---|
| Protein GI | 297563987 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACTA CAGAAGAACA GGGGCCCGGC GCCGTCGAGG CCCCGCCCCG GACCGGCCCC
GTGGAGGAAC CGGGCAGGCG GCGTCCGCGC CGCCCGGGGT GGTTCCTGCC CTACGGCATG
GTGCTGCCCG CGGCGGTACT GGAGCTGCTG GTCCATATCG TCCCCATGGC CCTGGGGATC
TACATCGCGT TCACCTCGCT GACGCAGCTG ACCATCCGGC GCTGGACGAC GGCGCCGCTG
GTCGGCCTGG AGAACTTCGT CCGCGGTCTC GACCCCGGAA ACGCCCTGGG CAGCGCCCTG
TTCGAGAGCC TGTTCCGCAC CACCGTCTAC ACCGTGCTGG TGGTGGGGGT GTCGTGGGTG
CTGGGGATGG CCGCCGCCGT CGCGTTGAAC ACGAAGTTCC GGGGACGCGG CGTGCTGCGC
ACGCTGTTCC TCGTGCCCTA CGCCCTGCCG GTCTACGTCG CCGCGATCAT CTGGGCGTTC
ATGTTCAACC AGCGCGACGG CATGGTCAAC CGGGTGCTCG TGGAGGATCT GGGTCTGCTG
GACGAGCGCC CGTTCTGGCT CATCGGTGAG AACGCCTTCT GGGTGCTGGT GATCGTGTCG
GTGTGGCGGC TGTGGCCGTT CGCGTTCCTG ATGCTGCTGG CGGCGTTGCA GAGCATCCCC
GAGGACATGT ACGAGGCCGC GGCCATCGAC GGCGCCTCGA CCTGGAGGCG GTTCACCGGC
ATCACGCTGC CCATGGTGCG CCCGGCGAAC GCGGTCGTGC TGCTCGTCAT GACGTTGTGG
ACGTTCAACG AGTTCAACAT CCCCTTCCTG CTCTTCGGCG ACACCTCGCC CGAGAGCGCG
CGGCTGATCT CACCGCTAAT CTACGAGCAC TCCTTCGTCA ACTGGAACTT CGGCCTGGGC
GCCGCGATGA GCGTGCTGCT GCTCGTCGCG CTGGTCATCG CGTCGGCGGT CTACGTCCGA
CTGGTGCTGC CCAAGGGGAG CGGCAATGCA TGA
|
|---|
| Protein sequence | MSTTEEQGPG AVEAPPRTGP VEEPGRRRPR RPGWFLPYGM VLPAAVLELL VHIVPMALGI
YIAFTSLTQL TIRRWTTAPL VGLENFVRGL DPGNALGSAL FESLFRTTVY TVLVVGVSWV
LGMAAAVALN TKFRGRGVLR TLFLVPYALP VYVAAIIWAF MFNQRDGMVN RVLVEDLGLL
DERPFWLIGE NAFWVLVIVS VWRLWPFAFL MLLAALQSIP EDMYEAAAID GASTWRRFTG
ITLPMVRPAN AVVLLVMTLW TFNEFNIPFL LFGDTSPESA RLISPLIYEH SFVNWNFGLG
AAMSVLLLVA LVIASAVYVR LVLPKGSGNA
|
|---|
| |