Gene Rleg_5336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5336 
Symbol 
ID8007294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp741258 
End bp742190 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content60% 
IMG OID644822240 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002973500 
Protein GI241113665 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.369054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATGG TGAATCCGGA GGATAGACGC GGGCCGATCT CCTCGCTCCT GCAGAACAAC 
AATGTTCTCG GCTTCCTGTT CATGCTGCCA GCGGCAGTGT TCCTCGTCTG CTTTCTGACC
TATCCGCTGG GGCTCGGTGT CTGGCTCGGC TTCACCGATA CGAGGATCGG CCGCGACGGC
GTCTTCATCG GCCTGGAGAA CTACCAGTTC CTGATGGACG ACAGCGTCTT CTGGCTGTCG
GTCTTCAACA CCATTCTCTA TACCTCCGTT GCCTCGGTGC TGAAATTCGC GCTCGGCCTC
TGGCTGGCGA TGCTGCTCAA TCAGCACCTA CCGTTCAAGT CCTTCTTCCG GGCGATCGTG
CTGCTTCCCT GGGTCGTGCC GACGGTGCTT TCGGCGCTGG CCTTCTGGTG GATCTACGAT
TCCCAGTTTT CGATCATCTC CTGGTCGCTG ATGCAGCTGG GGTTGATCAA CGGACCGATC
AATTTTCTCG GCGACCCCAT CAATGCGCGC ATATCCGTCA TCGTCGCCAA TGTCTGGCGC
GGCATTCCCT TCGTGGCGAT CTCGCTGCTT GCGGGGCTGC AGACGATTCC GGCGTCGCTG
CAGGAGGCCG CCTCTCTCGA CGGCGCCACG AGCTGGCAAC GGTTCCGCTA TGTGACGCTG
CCGATGTTGA CGCCGATCAT TGCCGTTGTG ATGACCTTCT CGGTTCTCTT CACCTTTACG
GATTTCCAGC TCATCTACGT GCTGACCAAG GGGGGACCGG TCAACGCGAC GCATCTGATG
GCGACGCTAT CGTTCCAGCG CGGCATTCCG GGCGGTCAGC TCGGAGAAGG TGCGGCCATC
GCAGTCGCCA TGGTGCCCTT CCTGCTCGGC GCCATCATGT TTAGCTTCTT CGGCTTGCAA
CGGCGCAAAT GGCAACAGGG CGGCCAGGAT TAG
 
Protein sequence
MSMVNPEDRR GPISSLLQNN NVLGFLFMLP AAVFLVCFLT YPLGLGVWLG FTDTRIGRDG 
VFIGLENYQF LMDDSVFWLS VFNTILYTSV ASVLKFALGL WLAMLLNQHL PFKSFFRAIV
LLPWVVPTVL SALAFWWIYD SQFSIISWSL MQLGLINGPI NFLGDPINAR ISVIVANVWR
GIPFVAISLL AGLQTIPASL QEAASLDGAT SWQRFRYVTL PMLTPIIAVV MTFSVLFTFT
DFQLIYVLTK GGPVNATHLM ATLSFQRGIP GGQLGEGAAI AVAMVPFLLG AIMFSFFGLQ
RRKWQQGGQD