More than 300 homologs were found in PanDaTox collection
for query gene M446_1316 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_1316  binding-protein-dependent transport systems inner membrane component  100 
 
 
318 aa  629  1e-179  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.106475 
 
 
-
 
NC_012792  Vapar_6266  binding-protein-dependent transport systems inner membrane component  69.3 
 
 
320 aa  419  1e-116  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3816  binding-protein-dependent transport systems inner membrane component  71.24 
 
 
327 aa  408  1e-113  Polaromonas sp. JS666  Bacteria  normal  0.744275  normal 
 
 
-
 
NC_011898  Ccel_0201  binding-protein-dependent transport systems inner membrane component  36.18 
 
 
294 aa  187  2e-46  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  38.6 
 
 
307 aa  185  7e-46  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  38.6 
 
 
307 aa  185  7e-46  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  36.88 
 
 
309 aa  177  1e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_8235  ABC transporter, permease protein  38.69 
 
 
306 aa  174  1.9999999999999998e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4663  binding-protein-dependent transport systems inner membrane component  34.44 
 
 
299 aa  171  1e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.456499 
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  33.77 
 
 
299 aa  167  2.9999999999999998e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  37.72 
 
 
312 aa  164  2.0000000000000002e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_014212  Mesil_2392  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
318 aa  161  2e-38  Meiothermus silvanus DSM 9946  Bacteria  normal  0.488692  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  32.01 
 
 
299 aa  160  3e-38  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  34.12 
 
 
328 aa  159  5e-38  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  33.75 
 
 
319 aa  159  6e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5138  ABC transporter membrane spanning protein (maltose)  37.86 
 
 
275 aa  159  7e-38  Agrobacterium vitis S4  Bacteria  normal  0.566756  n/a   
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  35 
 
 
296 aa  158  1e-37  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_012669  Bcav_3676  binding-protein-dependent transport systems inner membrane component  38.61 
 
 
309 aa  157  2e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  35.43 
 
 
305 aa  157  3e-37  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_6970  binding-protein-dependent transport systems inner membrane component  31.89 
 
 
305 aa  155  9e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0388505  normal 
 
 
-
 
NC_008010  Dgeo_2695  binding-protein-dependent transport systems inner membrane component  36.11 
 
 
309 aa  155  1e-36  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.179346  n/a   
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
296 aa  155  1e-36  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_13130  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
293 aa  155  1e-36  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2658  binding-protein-dependent transport systems inner membrane component  33.66 
 
 
309 aa  152  5e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.43514  n/a   
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  36.53 
 
 
310 aa  153  5e-36  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0941  binding-protein-dependent transport systems inner membrane component  34.71 
 
 
313 aa  152  8.999999999999999e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.737632 
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  33.57 
 
 
301 aa  150  3e-35  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  35.05 
 
 
306 aa  150  3e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_012034  Athe_0615  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
296 aa  149  4e-35  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  30.82 
 
 
290 aa  149  8e-35  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  32.51 
 
 
330 aa  148  1.0000000000000001e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  33.22 
 
 
321 aa  148  1.0000000000000001e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  29.79 
 
 
295 aa  147  2.0000000000000003e-34  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0627  binding-protein-dependent transport systems inner membrane component  29.96 
 
 
294 aa  147  2.0000000000000003e-34  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.0000000558297  n/a   
 
 
-
 
NC_010816  BLD_1304  MalF-type ABC sugar transport systems permease component  33.12 
 
 
334 aa  147  3e-34  Bifidobacterium longum DJO10A  Bacteria  decreased coverage  0.00913134  n/a   
 
 
-
 
NC_012853  Rleg_5674  binding-protein-dependent transport systems inner membrane component  31.51 
 
 
319 aa  147  3e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0325503  normal  0.167 
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  35 
 
 
299 aa  145  1e-33  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
309 aa  145  1e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  35.74 
 
 
287 aa  144  2e-33  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  30.63 
 
 
295 aa  144  2e-33  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_008543  Bcen2424_5659  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
313 aa  144  2e-33  Burkholderia cenocepacia HI2424  Bacteria  normal  0.308138  normal  0.32687 
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
291 aa  143  3e-33  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  31.99 
 
 
307 aa  143  4e-33  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_007802  Jann_1355  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
304 aa  143  5e-33  Jannaschia sp. CCS1  Bacteria  normal  0.0278828  normal  0.740502 
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  33.69 
 
 
320 aa  143  5e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_008061  Bcen_5200  binding-protein-dependent transport systems inner membrane component  32.31 
 
 
313 aa  142  5e-33  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1094  binding-protein-dependent transport systems inner membrane component  30.87 
 
 
307 aa  142  6e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
309 aa  142  8e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  33.85 
 
 
311 aa  142  8e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  33.01 
 
 
314 aa  142  9e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1681  binding-protein-dependent transport systems inner membrane component  33.84 
 
 
316 aa  142  9.999999999999999e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.130846  normal 
 
 
-
 
NC_013521  Sked_11550  carbohydrate ABC transporter membrane protein  33.96 
 
 
354 aa  141  9.999999999999999e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal  0.0144146 
 
 
-
 
NC_012669  Bcav_3942  binding-protein-dependent transport systems inner membrane component  34.01 
 
 
322 aa  141  9.999999999999999e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.300337 
 
 
-
 
NC_009667  Oant_0362  binding-protein-dependent transport systems inner membrane component  30.47 
 
 
312 aa  142  9.999999999999999e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.541424  n/a   
 
 
-
 
NC_013521  Sked_07100  carbohydrate ABC transporter membrane protein  31.97 
 
 
318 aa  141  1.9999999999999998e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.790586  normal 
 
 
-
 
NC_012669  Bcav_1541  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
327 aa  141  1.9999999999999998e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.128939 
 
 
-
 
NC_010320  Teth514_0754  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
324 aa  140  3e-32  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000204062  n/a   
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
307 aa  140  3.9999999999999997e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_010622  Bphy_2350  binding-protein-dependent transport systems inner membrane component  30.91 
 
 
317 aa  140  3.9999999999999997e-32  Burkholderia phymatum STM815  Bacteria  normal  normal  0.143445 
 
 
-
 
NC_010552  BamMC406_5488  binding-protein-dependent transport systems inner membrane component  32.72 
 
 
319 aa  139  3.9999999999999997e-32  Burkholderia ambifaria MC40-6  Bacteria  normal  0.80176  hitchhiker  0.000205378 
 
 
-
 
NC_010676  Bphyt_4587  binding-protein-dependent transport systems inner membrane component  32.9 
 
 
325 aa  140  3.9999999999999997e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  0.351015  normal 
 
 
-
 
NC_013526  Tter_2615  binding-protein-dependent transport systems inner membrane component  37.1 
 
 
307 aa  139  3.9999999999999997e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000296099  n/a   
 
 
-
 
NC_009636  Smed_3403  binding-protein-dependent transport systems inner membrane component  32.79 
 
 
315 aa  140  3.9999999999999997e-32  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_00850  carbohydrate ABC transporter membrane protein  36.77 
 
 
320 aa  139  4.999999999999999e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4576  binding-protein-dependent transport systems inner membrane component  32.9 
 
 
314 aa  139  4.999999999999999e-32  Burkholderia cenocepacia MC0-3  Bacteria  normal  hitchhiker  0.00748515 
 
 
-
 
NC_013411  GYMC61_2715  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
289 aa  139  4.999999999999999e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008391  Bamb_4933  binding-protein-dependent transport systems inner membrane component  33.02 
 
 
314 aa  139  6e-32  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.103484 
 
 
-
 
NC_012669  Bcav_2847  binding-protein-dependent transport systems inner membrane component  36.47 
 
 
305 aa  139  7e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.661532 
 
 
-
 
NC_013172  Bfae_01820  permease component of ABC-type sugar transporter  28.98 
 
 
312 aa  139  7e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  34.35 
 
 
316 aa  138  1e-31  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1134  binding-protein-dependent transport systems inner membrane component  28.52 
 
 
300 aa  138  1e-31  Clostridium cellulolyticum H10  Bacteria  normal  0.454536  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  35.17 
 
 
292 aa  137  2e-31  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_013739  Cwoe_4453  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
319 aa  137  2e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4016  binding-protein-dependent transport systems inner membrane component  36.05 
 
 
302 aa  137  2e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
309 aa  137  2e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
316 aa  137  2e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  32.64 
 
 
294 aa  137  3.0000000000000003e-31  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  38.43 
 
 
317 aa  137  3.0000000000000003e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
305 aa  137  3.0000000000000003e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_013172  Bfae_27710  permease component of ABC-type sugar transporter  34.11 
 
 
294 aa  137  3.0000000000000003e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
309 aa  136  4e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4985  binding-protein-dependent transport systems inner membrane component  38.11 
 
 
312 aa  136  4e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
298 aa  136  4e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2030  binding-protein-dependent transport systems inner membrane component  34.44 
 
 
297 aa  136  5e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.185813 
 
 
-
 
NC_008262  CPR_0905  transmembrane permease MsmF  32.51 
 
 
289 aa  136  5e-31  Clostridium perfringens SM101  Bacteria  normal  0.0122469  n/a   
 
 
-
 
NC_008578  Acel_2048  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
332 aa  136  5e-31  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0185  binding-protein-dependent transport systems inner membrane component  31.31 
 
 
315 aa  136  6.0000000000000005e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3154  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
304 aa  135  7.000000000000001e-31  Ruegeria sp. TM1040  Bacteria  normal  0.026642  normal 
 
 
-
 
NC_007958  RPD_3149  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
315 aa  135  9e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566553  normal  0.330059 
 
 
-
 
NC_011769  DvMF_0657  binding-protein-dependent transport systems inner membrane component  33.86 
 
 
297 aa  135  9e-31  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.235569 
 
 
-
 
NC_013595  Sros_0295  ABC-type sugar transport system periplasmic component-like protein  33.09 
 
 
300 aa  135  9e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  34.82 
 
 
296 aa  135  9e-31  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  35.94 
 
 
293 aa  135  9.999999999999999e-31  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  31.86 
 
 
317 aa  134  9.999999999999999e-31  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_008699  Noca_3915  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
320 aa  135  9.999999999999999e-31  Nocardioides sp. JS614  Bacteria  normal  0.604651  n/a   
 
 
-
 
NC_009486  Tpet_0645  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
309 aa  135  9.999999999999999e-31  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000282921  n/a   
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  35.84 
 
 
283 aa  135  9.999999999999999e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3547  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
314 aa  135  9.999999999999999e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0450985  n/a   
 
 
-
 
NC_011899  Hore_13190  binding-protein-dependent transport systems inner membrane component  30.94 
 
 
289 aa  134  9.999999999999999e-31  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3195  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
312 aa  135  9.999999999999999e-31  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.142654 
 
 
-
 
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