Gene Rleg_5674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5674 
Symbol 
ID8016900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp252327 
End bp253286 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content62% 
IMG OID644827827 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002979027 
Protein GI241518399 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0325503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCA CCTCCGCTTC CCCGGCGCGG GAGGCGGCGG GTGTGATGCA GGTTTCCCCG 
CTGGCGGTCA GCATTCAAGG CCGTGGGCGT CTGCTCAGGG ACACGCCCGC CGCATTGATC
CTGATCGCAC CCGTCATCGT GCTCTTTGCC GTCGCCGTCG TCTATCCGCT GGTGGAGACT
ATCCGCTTGA GCTTCTGGGA CATACAGGGC CTGCGGAAGC CTTCCTTCAT CGGCTTCGGC
AATTATGTGC GGCTGTTTTC GGACGCCGCC TTTCGCAGCA CGCTGCTATC GACCCTGATC
TTCACGATCG GGACGACGGT GATTTCCGTC TCGATTGGCT GGGCTCTGGC AATGACGTGC
GCGTTCGCGC CACGACAGAC GCTGCCGTTC CGCGTGATGA TCTTTGCCGC CTTCGGTATT
TCGGAGGCAG TTTCGGGCTA CATGTGGATC GGCATCTACA GGGCCGATGC CGGCGGCCTG
CTCAATTCGC TGATTCAGCT TTTCGGGTTT TCCGGCTTCT CGCATGCTTG GCTCGGTGAC
GCCAATACCG CACTGTGGGC GCTCATCATA GCCGCATCGT GGAGCGGCGT GGGCTTGCCC
TTAATGCTGA TCTTCGCCGC CATCCAGGCA ATCCCGAAAT CCGTGCTCGA GGCAGCCTAT
ATGGACGGCG CCAAGCCGCT CTCGACCATG CGCCATATCA TGATGCCGCT GTCGATGCCC
GGCGTGCGTG TCGCGGTTTT CATCAATCTT CTGGGTTCGC TGCGCGCCTT CGACATCATC
TACATCCTGA CGGGCGGCGG ACCGGTGCGC TCAACCGAGA CGGTCGGCTA TTTCATGTAC
CGGGAATCCA TGACCCAGTT CAAACTGGGC TATGGCGCCG CCGCGACCGT CATCCTGCTG
CTGGCCGTGC TCATCGTCTC GATCCCCGCC ATCATCCAGC GAACGGCAGG TGCGAAATGA
 
Protein sequence
MAGTSASPAR EAAGVMQVSP LAVSIQGRGR LLRDTPAALI LIAPVIVLFA VAVVYPLVET 
IRLSFWDIQG LRKPSFIGFG NYVRLFSDAA FRSTLLSTLI FTIGTTVISV SIGWALAMTC
AFAPRQTLPF RVMIFAAFGI SEAVSGYMWI GIYRADAGGL LNSLIQLFGF SGFSHAWLGD
ANTALWALII AASWSGVGLP LMLIFAAIQA IPKSVLEAAY MDGAKPLSTM RHIMMPLSMP
GVRVAVFINL LGSLRAFDII YILTGGGPVR STETVGYFMY RESMTQFKLG YGAAATVILL
LAVLIVSIPA IIQRTAGAK