Gene M446_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1316 
Symbol 
ID6134636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1448716 
End bp1449672 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content69% 
IMG OID641641597 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001768268 
Protein GI170739613 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.106475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGCA CGGCGGGCGT GGACGCGGCG GCGCCGGCCG CCCCGCCCGC GGCGGCGCGC 
GCGCGCGCCT TCGATCCCCG CCGGGCGAGC CTGCCGGTGG TGGCGCTCTT CGTGGGGCCG
GCGCTGGCGG TCTATGCCGG GCTCACCGCC TACCCGGCCA TCCGGACCTT CTACGACAGC
TTCTTCACCA TCGAGGGGAT GGAGCGCCAA GCGGTCGGCC TCGCGAATTA CCGCGACCTC
CTCGCCGACG AGACCTTCTG GGTCGCGGTG CGCAACACCT TCGTGTGGGC CTTCGCGGCG
CCGGTCCTCG ACGTCGCCAC CGGGCTGCTC CTCGCGCTCG CCCTCTACGC GGGCGTGCCC
TTCGGGAGAT TCCTGCGGGT GGCGTGGTTC GCCCCCGTGC TGCTCTCCTA CGTGGTCGTC
GCGATCCTGT GGATGTGGAT CTACAACTAC GATTGGGGGG TGGTGAACGT GGCGCTGCGG
GCGCTCGGCC TCGACGCGCT CACCCGCTCC TGGCTCGGCG ACCCCGCCAC CGCGCTCGCC
GCGCTCATCG TCACGCATGC GTGGAAATGG GCGGGGTTCA ACATGGTGGT CTGCCTCGCC
GCCATCCACG CGCTGCCCTC CGAGGTGCTG GAGGCGAGCG AGCTCGACAA TTGCGGCTGG
GGCGCCAAGC TGCGCCACAT CATCGTACCG ATGCTGCGCC CGACGCTGCT CAACCTCTAC
GTCCTCGCCT TCATCGGCAA GATGAAGGTG TTCGACCTCG TCTGGATCAT GACCGGAGGC
GGCCCGCTCT GGGCGACCGA GACGGTCTCG ACCTACGTCT ACAAGCGCGC GTTCAACTGG
AACACCTTCG ATCTCGGCTA CCCGTCCGCC ATCGCGGCGG TGTGGTTCGG CGTCGTCTGC
GCCTGCGTGC TGGTGCTCAA CCGGCTGTTC AGATCCTCGG AGAGGCTGGA GTACTGA
 
Protein sequence
MSGTAGVDAA APAAPPAAAR ARAFDPRRAS LPVVALFVGP ALAVYAGLTA YPAIRTFYDS 
FFTIEGMERQ AVGLANYRDL LADETFWVAV RNTFVWAFAA PVLDVATGLL LALALYAGVP
FGRFLRVAWF APVLLSYVVV AILWMWIYNY DWGVVNVALR ALGLDALTRS WLGDPATALA
ALIVTHAWKW AGFNMVVCLA AIHALPSEVL EASELDNCGW GAKLRHIIVP MLRPTLLNLY
VLAFIGKMKV FDLVWIMTGG GPLWATETVS TYVYKRAFNW NTFDLGYPSA IAAVWFGVVC
ACVLVLNRLF RSSERLEY