| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3154 |
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| Symbol | |
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| ID | 4075324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 135160 |
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| End bp | 136074 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638004657 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_611390 |
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| Protein GI | 99078132 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.026642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGC CCCGCATCCG CTGGCATATC GCCATTTTTC TGGCCCCTGC CGTGCTGATC
TACACCTCGG TTATGATCTT CCCCCTCTTC AACACGCTGC GCCTCGCTCT CTTTCAGGAG
ATCGATCAGG AGCGCGTCTA TGTGGGGCTG GAGAATTTCC GCACGCTGTT CTTTGACCCG
ATCTGGTCAG AGCAATTCTG GAACGCGCTG GGAAACAACT TCTGGTTCTT CCTCATTCAC
ATGCTGGTGC AAAACCCCAT CGGGATCGCC CTTGCGGCCC TCCTGAGCCA TCCGCGCCTG
CGCTTTGCGG CGCTCTATCG CTCCGCGATC TTCATCCCGA CGATCCTGAG CTTTGTGATC
GTGGGTTTTG CGTGGAAGCT CATCCTGTCG CCCATCTGGG GCATCGCGCC TTCTATGCTG
GATGCGGTCG GTCTGAAATC GCTCTTTGCA CCCTGGCTCG GCAAGGAAGA ATACGCCCTC
ACCACGCTGG CGCTGATCTC CGTTTGGCAA TTCGTCGGTA TCCCGATGAT GCTGATCTAT
GCCGCGCTGC TGTCGATCCC CGAAGAAATG CTCGAGGCGG GCGAAATTGA CGGCGTCACC
GGCATGTCCG CCTTCTGGAA GATCAAACTG CCGCTGATCC TGCCCTCGAT CGGGATCATC
TCGATCCTGA CATTTGTGGG CAACTTCAAC GCCTTCGACC TGATCTACGC CTCCCAAGGC
GCATTGGCGG GGCCTGATTT CTCCACTGAC ATCTTGGGCA CATTCATGTA CCGGACGTTC
TTTGGTTTCC AGCTGCAACT TGGCGATCCG CATATGGGGT CCGCGATTGC AGGGGCAATG
TTTGCGATCA TCCTTGTAGG CGTCTGTCTT TATCTCTTCG GCATCCAGAC CCGGATGCGC
CGCTACCAGC TCTGA
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| Protein sequence | MQKPRIRWHI AIFLAPAVLI YTSVMIFPLF NTLRLALFQE IDQERVYVGL ENFRTLFFDP
IWSEQFWNAL GNNFWFFLIH MLVQNPIGIA LAALLSHPRL RFAALYRSAI FIPTILSFVI
VGFAWKLILS PIWGIAPSML DAVGLKSLFA PWLGKEEYAL TTLALISVWQ FVGIPMMLIY
AALLSIPEEM LEAGEIDGVT GMSAFWKIKL PLILPSIGII SILTFVGNFN AFDLIYASQG
ALAGPDFSTD ILGTFMYRTF FGFQLQLGDP HMGSAIAGAM FAIILVGVCL YLFGIQTRMR
RYQL
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