More than 300 homologs were found in PanDaTox collection
for query gene Franean1_0551 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_0551  LuxR family transcriptional regulator  100 
 
 
76 aa  154  4e-37  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0353  two component LuxR family transcriptional regulator  57.89 
 
 
213 aa  94  7e-19  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0423  two component LuxR family transcriptional regulator  55.26 
 
 
213 aa  89.7  1e-17  Salinispora arenicola CNS-205  Bacteria  normal  0.450903  hitchhiker  0.0058743 
 
 
-
 
NC_009921  Franean1_0340  two component LuxR family transcriptional regulator  55.26 
 
 
221 aa  85.1  3e-16  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0115466 
 
 
-
 
NC_013510  Tcur_4661  two component transcriptional regulator, LuxR family  59.42 
 
 
220 aa  84.7  4e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6197  response regulator receiver protein  55.84 
 
 
215 aa  84.3  5e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.376562  normal 
 
 
-
 
NC_013739  Cwoe_3717  two component transcriptional regulator, LuxR family  54.05 
 
 
217 aa  84.3  5e-16  Conexibacter woesei DSM 14684  Bacteria  normal  0.82478  normal 
 
 
-
 
NC_013093  Amir_2757  two component transcriptional regulator, LuxR family  52.63 
 
 
214 aa  82.4  0.000000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0593961  n/a   
 
 
-
 
NC_012669  Bcav_1359  two component transcriptional regulator, LuxR family  56.94 
 
 
219 aa  80.5  0.000000000000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.323671 
 
 
-
 
NC_013131  Caci_0198  two component transcriptional regulator, LuxR family  52.7 
 
 
218 aa  79.7  0.00000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6700  two component LuxR family transcriptional regulator  59.42 
 
 
257 aa  80.1  0.00000000000001  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1960  two component transcriptional regulator, LuxR family  52.7 
 
 
215 aa  79.3  0.00000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000329107  hitchhiker  0.00000396613 
 
 
-
 
NC_013595  Sros_3199  response regulator receiver protein  52.63 
 
 
212 aa  77.8  0.00000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3915  two component transcriptional regulator, LuxR family  55.41 
 
 
226 aa  77.8  0.00000000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.161295  normal  0.0598624 
 
 
-
 
NC_014210  Ndas_2432  two component transcriptional regulator, LuxR family  52.05 
 
 
233 aa  76.3  0.0000000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.199835  normal  0.129248 
 
 
-
 
NC_013510  Tcur_3933  two component transcriptional regulator, LuxR family  50 
 
 
218 aa  76.6  0.0000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4605  two component transcriptional regulator, LuxR family  52.17 
 
 
222 aa  75.5  0.0000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.554224  normal 
 
 
-
 
NC_009921  Franean1_7246  two component LuxR family transcriptional regulator  46.67 
 
 
215 aa  75.9  0.0000000000002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.172833 
 
 
-
 
NC_013947  Snas_2341  two component transcriptional regulator, LuxR family  49.35 
 
 
215 aa  75.5  0.0000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2073  two component LuxR family transcriptional regulator  52 
 
 
217 aa  75.1  0.0000000000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.776481 
 
 
-
 
NC_013521  Sked_09230  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.34 
 
 
218 aa  75.1  0.0000000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.310613 
 
 
-
 
NC_013530  Xcel_0244  two component transcriptional regulator, LuxR family  49.33 
 
 
216 aa  75.1  0.0000000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0203  two component transcriptional regulator, LuxR family  54.55 
 
 
218 aa  74.7  0.0000000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1653  response regulator receiver protein  48.65 
 
 
220 aa  74.7  0.0000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.799733  normal 
 
 
-
 
NC_009921  Franean1_2504  two component LuxR family transcriptional regulator  56.25 
 
 
218 aa  74.7  0.0000000000004  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00866313  normal 
 
 
-
 
NC_008541  Arth_3490  two component LuxR family transcriptional regulator  56.25 
 
 
218 aa  74.3  0.0000000000005  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0948  two component transcriptional regulator, LuxR family  53.73 
 
 
214 aa  74.3  0.0000000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_7225  two component LuxR family transcriptional regulator  52.63 
 
 
229 aa  74.3  0.0000000000005  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2524  two component transcriptional regulator, LuxR family  54.67 
 
 
228 aa  73.9  0.0000000000006  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0516799  n/a   
 
 
-
 
NC_013595  Sros_4416  response regulator receiver protein  49.3 
 
 
228 aa  73.6  0.0000000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0335955 
 
 
-
 
NC_007777  Francci3_0084  two component LuxR family transcriptional regulator  52.63 
 
 
239 aa  73.6  0.0000000000009  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2389  two component transcriptional regulator, LuxR family  47.83 
 
 
215 aa  72.4  0.000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.205007  decreased coverage  0.00115827 
 
 
-
 
NC_013530  Xcel_1460  two component transcriptional regulator, LuxR family  45.33 
 
 
224 aa  72  0.000000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.659068  n/a   
 
 
-
 
NC_013530  Xcel_0212  two component transcriptional regulator, LuxR family  55.38 
 
 
218 aa  71.2  0.000000000004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4455  two component transcriptional regulator, LuxR family  47.83 
 
 
213 aa  71.2  0.000000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6137  response regulator receiver protein  50 
 
 
209 aa  71.2  0.000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.633642  normal  0.13111 
 
 
-
 
NC_013131  Caci_0636  two component transcriptional regulator, LuxR family  43.42 
 
 
214 aa  70.9  0.000000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.583432 
 
 
-
 
NC_013739  Cwoe_3908  two component transcriptional regulator, LuxR family  50 
 
 
214 aa  71.2  0.000000000005  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0263  two component LuxR family transcriptional regulator  53.12 
 
 
214 aa  71.2  0.000000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.103764 
 
 
-
 
NC_013093  Amir_0530  two component transcriptional regulator, LuxR family  52.17 
 
 
214 aa  70.5  0.000000000007  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0201422  n/a   
 
 
-
 
NC_014151  Cfla_3103  two component transcriptional regulator, LuxR family  54.84 
 
 
223 aa  70.1  0.000000000009  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.156187  hitchhiker  0.000316121 
 
 
-
 
NC_013131  Caci_1254  two component transcriptional regulator, LuxR family  49.3 
 
 
213 aa  69.7  0.00000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1917  two component transcriptional regulator, LuxR family  44.59 
 
 
215 aa  69.7  0.00000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4725  two component transcriptional regulator, LuxR family  50 
 
 
218 aa  69.7  0.00000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.37253  normal 
 
 
-
 
NC_009921  Franean1_2299  two component LuxR family transcriptional regulator  50 
 
 
242 aa  69.7  0.00000000001  Frankia sp. EAN1pec  Bacteria  normal  0.0379402  normal 
 
 
-
 
NC_008146  Mmcs_3909  two component LuxR family transcriptional regulator  52.24 
 
 
211 aa  69.3  0.00000000002  Mycobacterium sp. MCS  Bacteria  normal  0.755905  n/a   
 
 
-
 
NC_008705  Mkms_3983  two component LuxR family transcriptional regulator  52.24 
 
 
214 aa  68.9  0.00000000002  Mycobacterium sp. KMS  Bacteria  normal  0.714996  normal 
 
 
-
 
NC_009077  Mjls_3924  two component LuxR family transcriptional regulator  52.24 
 
 
214 aa  68.9  0.00000000002  Mycobacterium sp. JLS  Bacteria  normal  normal  0.278782 
 
 
-
 
NC_013947  Snas_2250  two component transcriptional regulator, LuxR family  45.95 
 
 
217 aa  69.3  0.00000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137071 
 
 
-
 
NC_014210  Ndas_2092  two component transcriptional regulator, LuxR family  47.95 
 
 
216 aa  69.3  0.00000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2641  two component transcriptional regulator, LuxR family  41.33 
 
 
220 aa  68.2  0.00000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.53526  normal 
 
 
-
 
NC_007333  Tfu_0330  LuxR response regulator receiver  51.56 
 
 
219 aa  68.6  0.00000000003  Thermobifida fusca YX  Bacteria  normal  0.673991  n/a   
 
 
-
 
NC_013172  Bfae_12650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.75 
 
 
217 aa  68.6  0.00000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  0.129544  n/a   
 
 
-
 
NC_009338  Mflv_2280  two component LuxR family transcriptional regulator  47.37 
 
 
214 aa  68.2  0.00000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.92337  normal  0.457915 
 
 
-
 
NC_013510  Tcur_4729  two component transcriptional regulator, LuxR family  50 
 
 
212 aa  68.6  0.00000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_35890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.45 
 
 
239 aa  67.8  0.00000000005  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479689 
 
 
-
 
NC_013172  Bfae_11890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50 
 
 
213 aa  67.8  0.00000000005  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_9330  response regulator receiver protein  52.17 
 
 
221 aa  67.8  0.00000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.603744 
 
 
-
 
NC_014210  Ndas_3517  two component transcriptional regulator, LuxR family  49.28 
 
 
214 aa  67.4  0.00000000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.498529  normal 
 
 
-
 
NC_009921  Franean1_5809  LuxR family transcriptional regulator  59.65 
 
 
57 aa  67.4  0.00000000007  Frankia sp. EAN1pec  Bacteria  normal  0.37  normal  0.987085 
 
 
-
 
NC_013235  Namu_0810  two component transcriptional regulator, LuxR family  45.83 
 
 
219 aa  66.6  0.0000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3545  LuxR family two component transcriptional regulator  50.75 
 
 
213 aa  66.6  0.0000000001  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.701363 
 
 
-
 
NC_009380  Strop_2758  response regulator receiver  46.05 
 
 
220 aa  66.6  0.0000000001  Salinispora tropica CNB-440  Bacteria  normal  0.21835  normal  0.0217102 
 
 
-
 
NC_013739  Cwoe_5165  two component transcriptional regulator, LuxR family  44.59 
 
 
214 aa  65.9  0.0000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.852017  normal 
 
 
-
 
NC_013595  Sros_4051  response regulator receiver protein  48.68 
 
 
214 aa  65.5  0.0000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.004601 
 
 
-
 
NC_013739  Cwoe_0320  two component transcriptional regulator, LuxR family  44.74 
 
 
218 aa  66.2  0.0000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.308686  normal  0.0930841 
 
 
-
 
NC_009664  Krad_3331  two component transcriptional regulator, LuxR family  48.61 
 
 
216 aa  65.9  0.0000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0226882  normal  0.21338 
 
 
-
 
NC_013595  Sros_2506  response regulator receiver protein  47.83 
 
 
223 aa  65.5  0.0000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.189025  normal  0.663488 
 
 
-
 
NC_013739  Cwoe_0318  two component transcriptional regulator, LuxR family  46.05 
 
 
221 aa  65.1  0.0000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.29485  normal  0.172489 
 
 
-
 
NC_008726  Mvan_4386  two component LuxR family transcriptional regulator  47.37 
 
 
209 aa  64.3  0.0000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_2928  two component transcriptional regulator, LuxR family  44.74 
 
 
243 aa  64.3  0.0000000006  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000012449  hitchhiker  0.0000084288 
 
 
-
 
NC_013739  Cwoe_3762  two component transcriptional regulator, LuxR family  47.69 
 
 
221 aa  63.9  0.0000000006  Conexibacter woesei DSM 14684  Bacteria  normal  0.355338  normal  0.813095 
 
 
-
 
NC_014210  Ndas_2133  two component transcriptional regulator, LuxR family  48.68 
 
 
214 aa  63.9  0.0000000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0220  response regulator receiver protein  48.68 
 
 
241 aa  63.9  0.0000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0307  two component transcriptional regulator, LuxR family  45.21 
 
 
214 aa  63.9  0.0000000008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.115356  normal  0.300779 
 
 
-
 
NC_013093  Amir_2699  two component transcriptional regulator, LuxR family  50 
 
 
226 aa  63.5  0.000000001  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000000630711  n/a   
 
 
-
 
NC_013595  Sros_2300  response regulator receiver protein  45.83 
 
 
213 aa  63.2  0.000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1992  two component transcriptional regulator, LuxR family  48.44 
 
 
218 aa  62.8  0.000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3862  two component transcriptional regulator, LuxR family  45.07 
 
 
213 aa  62.4  0.000000002  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00236143  normal 
 
 
-
 
NC_013947  Snas_5645  two component transcriptional regulator, LuxR family  46.15 
 
 
215 aa  61.6  0.000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.117498 
 
 
-
 
NC_009664  Krad_4020  two component transcriptional regulator, LuxR family  50 
 
 
215 aa  60.8  0.000000006  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.000894251  normal  0.0789775 
 
 
-
 
NC_013235  Namu_3029  two component transcriptional regulator, LuxR family  41.89 
 
 
815 aa  60.5  0.000000008  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00871852  hitchhiker  0.00628617 
 
 
-
 
NC_009921  Franean1_4332  two component LuxR family transcriptional regulator  50.82 
 
 
225 aa  60.5  0.000000008  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00650273  normal 
 
 
-
 
NC_009921  Franean1_6494  two component LuxR family transcriptional regulator  47.95 
 
 
235 aa  59.7  0.00000001  Frankia sp. EAN1pec  Bacteria  normal  0.0149487  normal  0.504125 
 
 
-
 
NC_013093  Amir_4689  two component transcriptional regulator, LuxR family  46.27 
 
 
216 aa  59.3  0.00000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8722  response regulator receiver protein  48.48 
 
 
210 aa  58.5  0.00000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_17580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.08 
 
 
211 aa  58.2  0.00000004  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0315732  normal  0.450672 
 
 
-
 
NC_013131  Caci_0610  two component transcriptional regulator, LuxR family  45.16 
 
 
215 aa  58.2  0.00000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.440854 
 
 
-
 
NC_013235  Namu_1746  two component transcriptional regulator, LuxR family  48.39 
 
 
222 aa  57.8  0.00000005  Nakamurella multipartita DSM 44233  Bacteria  normal  0.139209  normal  0.0305301 
 
 
-
 
NC_009338  Mflv_0968  two component LuxR family transcriptional regulator  47.95 
 
 
220 aa  56.6  0.0000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_07220  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.69 
 
 
226 aa  56.2  0.0000002  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.740026 
 
 
-
 
NC_008726  Mvan_5906  two component LuxR family transcriptional regulator  47.95 
 
 
228 aa  55.5  0.0000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.363446  normal 
 
 
-
 
NC_013739  Cwoe_3050  two component transcriptional regulator, LuxR family  37.84 
 
 
214 aa  55.1  0.0000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.127757  normal 
 
 
-
 
NC_009523  RoseRS_4503  two component LuxR family transcriptional regulator  54 
 
 
221 aa  54.3  0.0000005  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.0169691 
 
 
-
 
NC_013595  Sros_0503  response regulator receiver protein  50 
 
 
226 aa  53.9  0.0000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.544154  normal 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  49.02 
 
 
227 aa  53.5  0.0000009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013739  Cwoe_1501  two component transcriptional regulator, LuxR family  44.93 
 
 
228 aa  53.5  0.000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.138703 
 
 
-
 
NC_014158  Tpau_0972  two component transcriptional regulator, LuxR family  45.16 
 
 
208 aa  53.5  0.000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0138  two component transcriptional regulator, LuxR family  39.73 
 
 
220 aa  53.1  0.000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.84841  n/a   
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  56.82 
 
 
213 aa  53.1  0.000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal 
 
 
-
 
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