233 homologs were found in PanDaTox collection
for query gene Francci3_3163 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_3163  HAD family hydrolase  100 
 
 
449 aa  876    Frankia sp. CcI3  Bacteria  normal  0.0117236  normal  0.303399 
 
 
-
 
NC_009921  Franean1_1749  HAD family hydrolase  63.19 
 
 
366 aa  399  9.999999999999999e-111  Frankia sp. EAN1pec  Bacteria  normal  0.0343675  hitchhiker  0.000628636 
 
 
-
 
NC_013510  Tcur_2166  HAD-superfamily hydrolase, subfamily IIA  49.58 
 
 
334 aa  291  1e-77  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000345894  n/a   
 
 
-
 
NC_013131  Caci_5439  HAD-superfamily hydrolase, subfamily IIA  48.9 
 
 
344 aa  278  1e-73  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2016  HAD-superfamily hydrolase  53.06 
 
 
333 aa  273  5.000000000000001e-72  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0636976 
 
 
-
 
NC_013595  Sros_6062  sugar phosphatase of the HAD superfamily-like protein  50.51 
 
 
336 aa  258  1e-67  Streptosporangium roseum DSM 43021  Bacteria  normal  0.733702  normal 
 
 
-
 
NC_013757  Gobs_3015  HAD-superfamily hydrolase, subfamily IIA  51.35 
 
 
359 aa  255  9e-67  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.25557  n/a   
 
 
-
 
NC_007333  Tfu_2038  HAD family hydrolase  44.73 
 
 
334 aa  244  1.9999999999999999e-63  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1338  HAD-superfamily hydrolase, subfamily IIA  47.19 
 
 
338 aa  244  3e-63  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1122  HAD-superfamily hydrolase, subfamily IIA  40.22 
 
 
342 aa  242  7.999999999999999e-63  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.706316 
 
 
-
 
NC_013172  Bfae_13640  predicted sugar phosphatase of HAD superfamily  46.69 
 
 
343 aa  239  8e-62  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1250  HAD family hydrolase  44.38 
 
 
338 aa  238  2e-61  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.395408 
 
 
-
 
NC_013235  Namu_4076  Haloacid dehalogenase domain protein hydrolase  51.35 
 
 
366 aa  237  3e-61  Nakamurella multipartita DSM 44233  Bacteria  normal  0.125935  normal  0.0189831 
 
 
-
 
NC_013441  Gbro_2830  HAD-superfamily hydrolase, subfamily IIA  49.3 
 
 
675 aa  236  7e-61  Gordonia bronchialis DSM 43247  Bacteria  normal  0.31853  n/a   
 
 
-
 
NC_008699  Noca_2479  HAD family hydrolase  47.32 
 
 
332 aa  234  3e-60  Nocardioides sp. JS614  Bacteria  normal  0.19473  n/a   
 
 
-
 
NC_011886  Achl_1513  HAD-superfamily hydrolase, subfamily IIA  46.67 
 
 
329 aa  233  4.0000000000000004e-60  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000783822 
 
 
-
 
NC_008541  Arth_1514  HAD family hydrolase  46.76 
 
 
330 aa  229  6e-59  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3034  HAD-superfamily hydrolase, subfamily IIA  42.82 
 
 
335 aa  225  1e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.224813  normal  0.86283 
 
 
-
 
NC_010816  BLD_0800  putative HAD superfamily sugar phosphatase  44.66 
 
 
346 aa  224  2e-57  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_22170  predicted sugar phosphatase of HAD superfamily  42.22 
 
 
345 aa  223  4e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.368706  normal 
 
 
-
 
NC_009338  Mflv_3511  HAD family hydrolase  47.96 
 
 
337 aa  220  5e-56  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.540896  normal  0.0582396 
 
 
-
 
NC_014151  Cfla_1655  HAD-superfamily hydrolase, subfamily IIA  47.33 
 
 
337 aa  219  1e-55  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0557426  normal 
 
 
-
 
NC_013721  HMPREF0424_0678  HAD hydrolase, family IIA  42.86 
 
 
366 aa  217  2.9999999999999998e-55  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_008726  Mvan_3292  HAD family hydrolase  47.21 
 
 
337 aa  212  1e-53  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2359  HAD-superfamily hydrolase, subfamily IIA  46.29 
 
 
349 aa  209  9e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0246768  hitchhiker  0.00643781 
 
 
-
 
NC_009565  TBFG_11708  phosphatase  46.15 
 
 
353 aa  207  4e-52  Mycobacterium tuberculosis F11  Bacteria  normal  0.900168  normal  0.127356 
 
 
-
 
NC_009953  Sare_1898  HAD family hydrolase  42.33 
 
 
340 aa  206  7e-52  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0000214064 
 
 
-
 
NC_013159  Svir_25490  predicted sugar phosphatase of HAD superfamily  47.64 
 
 
336 aa  202  9.999999999999999e-51  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2968  HAD family hydrolase  50.79 
 
 
334 aa  202  9.999999999999999e-51  Mycobacterium sp. JLS  Bacteria  normal  0.0800557  normal  0.179686 
 
 
-
 
NC_008146  Mmcs_2953  HAD family hydrolase  50.79 
 
 
334 aa  201  1.9999999999999998e-50  Mycobacterium sp. MCS  Bacteria  normal  0.361868  n/a   
 
 
-
 
NC_008705  Mkms_2997  HAD family hydrolase  50.79 
 
 
334 aa  201  1.9999999999999998e-50  Mycobacterium sp. KMS  Bacteria  normal  0.411928  normal  0.553212 
 
 
-
 
NC_014158  Tpau_2385  HAD-superfamily hydrolase, subfamily IIA  45.67 
 
 
316 aa  199  7.999999999999999e-50  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3150  HAD-superfamily hydrolase, subfamily IIA  48.39 
 
 
365 aa  196  5.000000000000001e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.714605  normal 
 
 
-
 
NC_013093  Amir_5443  HAD-superfamily hydrolase, subfamily IIA  47.04 
 
 
264 aa  194  3e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.931975  n/a   
 
 
-
 
NC_009380  Strop_1907  HAD family hydrolase  42.52 
 
 
340 aa  191  2e-47  Salinispora tropica CNB-440  Bacteria  normal  normal  0.275606 
 
 
-
 
NC_013947  Snas_4443  HAD-superfamily hydrolase subfamily IIA  41.94 
 
 
360 aa  186  7e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.198933  normal  0.115883 
 
 
-
 
NC_012803  Mlut_14240  haloacid dehalogenase subfamily IIA protein  45.19 
 
 
276 aa  185  1.0000000000000001e-45  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00966269  n/a   
 
 
-
 
NC_005945  BAS4827  phosphatase  41.81 
 
 
254 aa  176  8e-43  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00162438  n/a   
 
 
-
 
NC_007530  GBAA_5192  phosphatase  41.81 
 
 
254 aa  176  8e-43  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.183726  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4780  HAD family hydrolase  41.38 
 
 
254 aa  176  8e-43  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5096  phosphatase  41.38 
 
 
254 aa  174  1.9999999999999998e-42  Bacillus cereus ATCC 10987  Bacteria  normal  0.344211  n/a   
 
 
-
 
NC_005957  BT9727_4668  4-nitrophenylphosphatase (p-nitrophenylphosphate phosphohydrolase)  41.38 
 
 
254 aa  174  1.9999999999999998e-42  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.265618  n/a   
 
 
-
 
NC_006274  BCZK4685  4-nitrophenylphosphatase (p-nitrophenylphosphate phosphohydrolase)  41.38 
 
 
254 aa  174  1.9999999999999998e-42  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000109873  n/a   
 
 
-
 
NC_011658  BCAH187_A5101  phosphatase,haloacid dehalogenase family  41.38 
 
 
254 aa  174  1.9999999999999998e-42  Bacillus cereus AH187  Bacteria  normal  0.348234  n/a   
 
 
-
 
NC_011773  BCAH820_5063  phosphatase,haloacid dehalogenase family  41.38 
 
 
254 aa  174  1.9999999999999998e-42  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_012793  GWCH70_2900  HAD-superfamily subfamily IIA hydrolase like protein  39.76 
 
 
257 aa  175  1.9999999999999998e-42  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0137  phosphatase,haloacid dehalogenase family  41.38 
 
 
254 aa  173  5e-42  Bacillus cereus G9842  Bacteria  normal  0.651243  normal 
 
 
-
 
NC_013525  Tter_1044  HAD-superfamily hydrolase, subfamily IIA  38.91 
 
 
266 aa  172  1e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A5102  phosphatase,haloacid dehalogenase family  40.95 
 
 
254 aa  171  2e-41  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3557  HAD family hydrolase  39.66 
 
 
254 aa  167  5e-40  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_07430  predicted sugar phosphatase of HAD superfamily  44.59 
 
 
274 aa  160  5e-38  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.699759  normal  0.0830184 
 
 
-
 
NC_013411  GYMC61_3045  HAD-superfamily subfamily IIA hydrolase like protein  38.98 
 
 
256 aa  158  2e-37  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_1643  HAD family hydrolase  38.78 
 
 
265 aa  157  3e-37  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.664632  hitchhiker  0.00147879 
 
 
-
 
NC_009523  RoseRS_1310  HAD family hydrolase  38.52 
 
 
265 aa  154  4e-36  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.300835 
 
 
-
 
NC_009513  Lreu_0563  HAD family hydrolase  35.17 
 
 
256 aa  144  3e-33  Lactobacillus reuteri DSM 20016  Bacteria  normal  0.0984026  n/a   
 
 
-
 
NC_004116  SAG0892  HAD superfamily hydrolase  36.9 
 
 
256 aa  143  7e-33  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.65538  n/a   
 
 
-
 
NC_011831  Cagg_2607  HAD-superfamily hydrolase, subfamily IIA  41.27 
 
 
269 aa  143  8e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.988604 
 
 
-
 
NC_009972  Haur_1592  HAD family hydrolase  41.63 
 
 
266 aa  142  9e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1215  HAD-superfamily hydrolase, subfamily IIA  31.87 
 
 
265 aa  142  9.999999999999999e-33  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1214  HAD family sugar phosphatase  34.4 
 
 
257 aa  140  7e-32  Streptococcus thermophilus LMD-9  Bacteria  decreased coverage  0.000012407  n/a   
 
 
-
 
NC_002976  SERP0515  HAD superfamily hydrolase  34.12 
 
 
259 aa  139  1e-31  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0928  HAD family hydrolase  34.7 
 
 
259 aa  134  3e-30  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0947  HAD family hydrolase  34.7 
 
 
259 aa  134  3e-30  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1888  HAD-superfamily hydrolase, subfamily IIA  36.99 
 
 
286 aa  134  3.9999999999999996e-30  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.772314  n/a   
 
 
-
 
NC_011886  Achl_0656  HAD-superfamily hydrolase, subfamily IIA  36.43 
 
 
276 aa  133  6e-30  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008530  LGAS_0444  HAD family sugar phosphatase  33.07 
 
 
260 aa  132  1.0000000000000001e-29  Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.00000000163433  normal  0.182428 
 
 
-
 
NC_009972  Haur_3370  HAD family hydrolase  34.81 
 
 
257 aa  129  9.000000000000001e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.109866  n/a   
 
 
-
 
NC_008541  Arth_0515  HAD family hydrolase  34.9 
 
 
276 aa  126  9e-28  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1083  HAD family hydrolase  31.32 
 
 
259 aa  125  1e-27  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_010627  Bphy_7446  HAD family hydrolase  34.14 
 
 
273 aa  125  2e-27  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008527  LACR_1254  HAD family sugar phosphatase  33.73 
 
 
257 aa  125  2e-27  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0106686  n/a   
 
 
-
 
NC_009486  Tpet_1037  HAD family hydrolase  31.32 
 
 
259 aa  124  5e-27  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_15000  predicted sugar phosphatase of HAD superfamily  35.63 
 
 
276 aa  123  7e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  0.039649  n/a   
 
 
-
 
NC_008531  LEUM_0039  HAD family sugar phosphatase  32.37 
 
 
258 aa  122  9.999999999999999e-27  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0615  HAD-superfamily hydrolase, subfamily IIA  35.5 
 
 
262 aa  122  1.9999999999999998e-26  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4163  HAD-superfamily hydrolase, subfamily IIA  36.93 
 
 
259 aa  120  3.9999999999999996e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.81021  normal 
 
 
-
 
NC_007333  Tfu_1760  HAD family hydrolase  35.68 
 
 
269 aa  120  4.9999999999999996e-26  Thermobifida fusca YX  Bacteria  normal  0.0798453  n/a   
 
 
-
 
NC_007963  Csal_0794  HAD family hydrolase  36.73 
 
 
257 aa  119  9.999999999999999e-26  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4736  HAD-superfamily hydrolase, subfamily IIA  35.97 
 
 
275 aa  119  9.999999999999999e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2757  HAD-superfamily hydrolase, subfamily IIA  34.13 
 
 
266 aa  119  9.999999999999999e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.13214  normal 
 
 
-
 
NC_014158  Tpau_0544  HAD-superfamily hydrolase, subfamily IIA  34.78 
 
 
261 aa  118  3e-25  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1911  HAD-superfamily hydrolase  36.11 
 
 
258 aa  117  3.9999999999999997e-25  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.104825 
 
 
-
 
NC_013093  Amir_0473  HAD-superfamily hydrolase, subfamily IIA  35.27 
 
 
262 aa  116  6.9999999999999995e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  0.28866  n/a   
 
 
-
 
NC_013530  Xcel_3145  HAD-superfamily hydrolase, subfamily IIA  35.52 
 
 
257 aa  116  6.9999999999999995e-25  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.386829  n/a   
 
 
-
 
NC_008146  Mmcs_1975  HAD family hydrolase  37.76 
 
 
257 aa  116  7.999999999999999e-25  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2021  HAD family hydrolase  37.76 
 
 
257 aa  116  7.999999999999999e-25  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1914  HAD-superfamily hydrolase, subfamily IIA  34.57 
 
 
261 aa  116  7.999999999999999e-25  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00534341  hitchhiker  0.000838349 
 
 
-
 
NC_008726  Mvan_2196  HAD family hydrolase  37.76 
 
 
271 aa  115  1.0000000000000001e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.467237 
 
 
-
 
NC_009077  Mjls_1955  HAD family hydrolase  37.76 
 
 
257 aa  115  1.0000000000000001e-24  Mycobacterium sp. JLS  Bacteria  normal  normal  0.363597 
 
 
-
 
NC_008699  Noca_1242  HAD family hydrolase  33.85 
 
 
268 aa  115  2.0000000000000002e-24  Nocardioides sp. JS614  Bacteria  normal  0.319101  n/a   
 
 
-
 
NC_013159  Svir_34110  predicted sugar phosphatase of HAD superfamily  35.97 
 
 
264 aa  114  5e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.800157  normal 
 
 
-
 
NC_013757  Gobs_4181  HAD-superfamily hydrolase, subfamily IIA  36.51 
 
 
260 aa  113  6e-24  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.646523  n/a   
 
 
-
 
NC_009362  OSTLU_33094  predicted protein  29.43 
 
 
308 aa  111  2.0000000000000002e-23  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal 
 
 
-
 
NC_013124  Afer_0894  HAD-superfamily hydrolase, subfamily IIA  37.93 
 
 
260 aa  111  3e-23  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.698447  n/a   
 
 
-
 
NC_013739  Cwoe_0839  HAD-superfamily hydrolase, subfamily IIA  35.09 
 
 
263 aa  111  3e-23  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.680617 
 
 
-
 
NC_013174  Jden_2424  HAD-superfamily hydrolase, subfamily IIA  33.9 
 
 
257 aa  111  3e-23  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.22995 
 
 
-
 
NC_014151  Cfla_2972  HAD-superfamily hydrolase, subfamily IIA  35.68 
 
 
257 aa  110  5e-23  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_3498  HAD-superfamily hydrolase, subfamily IIA  32.02 
 
 
261 aa  110  5e-23  Natrialba magadii ATCC 43099  Archaea  normal  0.622356  n/a   
 
 
-
 
NC_013947  Snas_6302  HAD-superfamily hydrolase subfamily IIA  32.78 
 
 
261 aa  110  8.000000000000001e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2722  HAD-superfamily hydrolase, subfamily IIA  31.45 
 
 
267 aa  108  2e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
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