Gene Mjls_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1955 
Symbol 
ID4877677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2061345 
End bp2062118 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content70% 
IMG OID640139254 
ProductHAD family hydrolase 
Protein accessionYP_001070234 
Protein GI126434543 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0647] Predicted sugar phosphatases of the HAD superfamily 
TIGRFAM ID[TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.363597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCTCCA ACACCCGATG CTGGCTCACC GACATGGACG GCGTGCTCGT CCGCGAAGAG 
CACGCCCTGC CCGGTGCCGC CGAGTTCCTC GCCCGGCTCG TCGAACGCGA GCGGCCGTTC
CTGGTCCTGA CGAACAACTC GATCTTCACC CCGCGTGACC TGGCCGCCCG GCTCGCGCGG
TCCGGGCTCA TCGTGCCGGA GGAGGCGATC TGGACCTCGG CGCTGGCCAC CGCGACCTTC
CTCGGCGACC AGTTGCCGGG CGGATCGGCC TACGTCATCG GCGAGGCGGG CCTGACCACC
GCGCTGCACG AGGCCGGGTA CACGCTGACC GACGTCGGCC CGGACTTCGT GGTGCTCGGG
GAGACCCGCA CCTACTCGTT CGAGGCGATC ACCAAGGCCG TCCGGCTGAT CCTCGGCGGT
GCCCGGTTCA TCGCCACCAA CCCGGACGTG ACCGGTCCGT CCGCGGAGGG TCCACTGCCC
GCCACCGGAT CGGTGGCCGC CATGATCACC AAGGCCACTG GGCGCGAACC CTACTTCGTG
GGGAAACCGA ATCCGATGAT GTTCCGCAGC GCCCTCAACC GCATCGAGGC GCATTCGGAG
GGCACGGTGA TGGTGGGCGA CCGGATGGAC ACCGACGTCG TGGCGGGTAT CGAGGCGGGG
CTGGAGACCA TCCTCGTGCT GACCGGGTCG ACGACCATCG AGGACGTCGA GCGGTATCCG
TTCCGGCCCA GCCGGGTACT GCCGTCCATC GCCGAAGCCA TCGACCTGGT GTGA
 
Protein sequence
MRSNTRCWLT DMDGVLVREE HALPGAAEFL ARLVERERPF LVLTNNSIFT PRDLAARLAR 
SGLIVPEEAI WTSALATATF LGDQLPGGSA YVIGEAGLTT ALHEAGYTLT DVGPDFVVLG
ETRTYSFEAI TKAVRLILGG ARFIATNPDV TGPSAEGPLP ATGSVAAMIT KATGREPYFV
GKPNPMMFRS ALNRIEAHSE GTVMVGDRMD TDVVAGIEAG LETILVLTGS TTIEDVERYP
FRPSRVLPSI AEAIDLV