Gene Aaci_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1888 
Symbol 
ID8425408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp1936519 
End bp1937379 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content65% 
IMG OID645028003 
ProductHAD-superfamily hydrolase, subfamily IIA 
Protein accessionYP_003185289 
Protein GI258511855 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0647] Predicted sugar phosphatases of the HAD superfamily 
TIGRFAM ID[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.772314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGTG CGTCATTGCC AGGGGAGATG TCTCCTGAAG CATTCTGGCA TTCGGGGTTC 
AAAGGCGCGC TCCTGGACCT CGACGGCACC TTGTTTCGCG GGCGAGCCGT GATCGAGGGG 
GCTCCCGAGT TTGTTCGCAC CCTTCGCTCG CGGGGCATTC AACCCATCTT TTTTACCAAC 
AACTCGTCGA GAACGCCTGT TCAGGTCGCC GCGTTTTTGC GCGATCTCGG CATCGGTGCC 
CATCCTGAGG AAGTGGCTAC GTCCGCCCAG GCGGCTGCCT TCCTGATTCG TCAACGAACG 
TCCGCCGCAT GTCAAGGCGA GCCGCCGATG GTCGCGTTTG TCGGCGGTCC CGGTTTGGAA 
GAGGCGCTTC GCGATGAGGG GCTCGAGCCG CGAAGGGCCC GGGCGGACGA ACTGCGGGCA 
GAATGGGTGA ATCGTGCCGC CGCCGTGGCG GTGGGGCTCG CACCGGACGC TTGCTATGGC 
GACCTTGCGC TTCTTGCGCG CGTCGCGCAT CGCGTCGGCT GGATGGTCCT GACGAATCCG 
GATCGACGGT TGCCCGTCGA GGACGGCTTC ATGCCCGGCA ACGGAGCGCT CGGCGCGTTT 
GTGCAGACGG CTTCGTCGGC CGAGGTGTTC GTGACGGGCA AACCGGATCC GTCGTTTGTC 
GACTATGCGC TCCACCGGTT CCATCTTCGT CGGGATGAAG TCGTCATCGT CGGAGACAAC 
GTGGAGACGG ACGTGGCGGC GGGGCGGGCG GCGGGCCTTG CGACGGTGTG GGTCAGGTCC 
GGGCTCGGAG GCGAGATCGA TCCGGCTCAT CCGCCCGAGT GGACGGTCGA CTCCGTGGCG 
TCGCTTCTTC CACACCATTG A
 
Protein sequence
MSRASLPGEM SPEAFWHSGF KGALLDLDGT LFRGRAVIEG APEFVRTLRS RGIQPIFFTN 
NSSRTPVQVA AFLRDLGIGA HPEEVATSAQ AAAFLIRQRT SAACQGEPPM VAFVGGPGLE 
EALRDEGLEP RRARADELRA EWVNRAAAVA VGLAPDACYG DLALLARVAH RVGWMVLTNP 
DRRLPVEDGF MPGNGALGAF VQTASSAEVF VTGKPDPSFV DYALHRFHLR RDEVVIVGDN 
VETDVAAGRA AGLATVWVRS GLGGEIDPAH PPEWTVDSVA SLLPHH