| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2424 |
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| Symbol | |
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| ID | 8381577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 2598496 |
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| End bp | 2599269 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645005188 |
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| Product | HAD-superfamily hydrolase, subfamily IIA |
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| Protein accession | YP_003162359 |
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| Protein GI | 256833632 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.22995 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCGCA CCATCGAATC CTGGCTCACT GACATGGACG GGGTCCTCGT CCACGAAGGG
CATGCCATCC CCGGCGCCCC TGAATTCATT GCCCGACTGC GGGAAAAGGA ACGGCCCTTC
CTCATCCTCA CGAACAACTC GATCTTCACC CCGCGTGACT TACGCGCACG GTTGTCTGCG
TCAGGCATTG AGGTGGACGA ATCAAATATT TGGACGTCAG CGTTGGCGAC AGCAAAGTTT
TGCGCCGATC AGATGCCTGG CGGGTCTGCC TACGCCATCG GGGAGGCAGG ACTGACCACC
GCACTGTATG AGGCTGGGTA CACGCTCACC GATTCGAGCC CTGATTATGT GGTGCTCGGG
GAAACGCGCA CCTATTCGTT TGAGGCGATC ACCAAGGCGG TGCGGCTCAT TCTTGATGGT
GCCCGGTTCA TTTGCACGAA CCCGGACCCA ACAGGTCCAT CCCAAGAAGG GCCGATGCCT
GCAACTGGTG CAGCCGCCGC GATGATCACC AAAGCCACCA AACGTGAACC GTACTTTGTC
GGCAAACCCA ACCCGATGAT GTTCCGTTCT GCGCTCAACC GTATCGATGC GCATTCAGAA
ACCACGGCCA TGATTGGTGA CCGGATGGAC ACTGACGTGG TCGCTGGTAT TGAAGCAGGG
TTGCAAACCT ACCTGGTTCT CACCGGGTCA ACGGCCCCGC ACGAGGTTGA CGGTTACCCG
TTCCGCCCGT CCGAGGTGCG CGATTCGATC GCGGACCTGA TCGACCTTAT TTAG
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| Protein sequence | MTRTIESWLT DMDGVLVHEG HAIPGAPEFI ARLREKERPF LILTNNSIFT PRDLRARLSA
SGIEVDESNI WTSALATAKF CADQMPGGSA YAIGEAGLTT ALYEAGYTLT DSSPDYVVLG
ETRTYSFEAI TKAVRLILDG ARFICTNPDP TGPSQEGPMP ATGAAAAMIT KATKREPYFV
GKPNPMMFRS ALNRIDAHSE TTAMIGDRMD TDVVAGIEAG LQTYLVLTGS TAPHEVDGYP
FRPSEVRDSI ADLIDLI
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