| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3163 |
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| Symbol | |
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| ID | 3903885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3741845 |
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| End bp | 3743194 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637880484 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_482249 |
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| Protein GI | 86741849 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0117236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.303399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGC CGGCCGCCGT GCCCGCGCCG GCGCACGAGA CCACGTCAAC CAGCCCTTCG
TCAGTCAGCC CTTCCGCGGT CTCCTCCGCT TCGTCGTCCT GCGGCTTGTC CGGTTCCTCT
GTGTCCTCTG TGTCCTCTGG TTTCTCCGTG TCTTCCGGCG GCTTCCCCGG GCCGTTGCGC
GGGACGGACC GGCCGCTGGC CGACCTGTTC GACGTCGCCC TGATGGATCT CGACGGTGTC
GTCAACCGTG GGGCCGCCGC CGTGCCACAC GCGGCCGGCA CCATCGCAGC CGCGGGCCGC
CGGGGGATGC GCACGGTGTA CGTCACGAAC AACGCACTGC GCCCGCCGGC CGAGGTCGCC
GCCCGCCTGC GCGGCTTCGG CGTGCCGGCG CAAACCGAGG ACGTCGTCAC CTCGGCGCAG
GCAGCGGCGC ACGTCCTGGC CGAACGGCTG GGCACCGGAT CCCGGGTGCT CATTACCGGA
GGGCGGGGAC TTCGACAGGC GGTGATGGAG GAGGGCCTGG TCCCGGTGGA CTCGGCCGAG
GACGATCCGG CGGCGGTGGT CCAGGGGTTC GACCCGGATC TCACCTATGC CCGCCTCGCC
GAGGCGGCCT ATGCCATCCG GGCCGGAGCA CTGTGGATCG CCAGCAACGC CGATCGCACC
GTGCCAACCG AGCGGGGCGT CGCGCCTGGT AACGGATCCG TCATCGCCTT CCTGCGGGCC
GCTACGGACC GCGAGCCGGT GGTGACCGGC AAGCCCGAGT CGGCGATGCA CCGCGAGTCG
ATGCGGCGCA GCGGAGCCCG GATACCCCTC ATCGTCGGTG ACCGGCTCGA CACCGACATC
GAGGCCGGTC ACCGGACGTC GACGCCGACC CTGCTCGTCT TCACCGGGGT GACGACCCCC
GGAGACCTGC TCGCAGCTCC CGCTCCGCAC CGTCCCGACT TCCTCGCCGC GGACCTGCGC
GGGCTGCTCC GGGCGGCGCC ACCGGTGGAG GCCGTCCCGG AGCTGGGGAA CCACGCCTAT
CGTTGCGGCG CCTGGAGCAG CCGGGTCGAG GAGGGGACGC TGCACTGGTC GGGTGAAAGC
TACGGGCTGG GCGATGACGC GTCGGATGGC GATCGTTCAG GCGGCGGTCA TTCCGGTGGG
GATGCGTCAG ACCGGGATAT GTCGGGTGAC GACACGTGGA ACGGGGACGG CACCGACGGG
CTGGACGGGC TGCGGGCCGC CTGCGCCACG GTCTGGTCCG CCCTGGACAG CGGCGTCGCC
GTCCACGCGA TCGCGGCGCG ACGCCCACCG GGTTGCGAGG ACCTGATGGC TCCGGCGCCC
CGGGCACCGG AGCCCGTGGC GCTCGCCTGA
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| Protein sequence | MTRPAAVPAP AHETTSTSPS SVSPSAVSSA SSSCGLSGSS VSSVSSGFSV SSGGFPGPLR
GTDRPLADLF DVALMDLDGV VNRGAAAVPH AAGTIAAAGR RGMRTVYVTN NALRPPAEVA
ARLRGFGVPA QTEDVVTSAQ AAAHVLAERL GTGSRVLITG GRGLRQAVME EGLVPVDSAE
DDPAAVVQGF DPDLTYARLA EAAYAIRAGA LWIASNADRT VPTERGVAPG NGSVIAFLRA
ATDREPVVTG KPESAMHRES MRRSGARIPL IVGDRLDTDI EAGHRTSTPT LLVFTGVTTP
GDLLAAPAPH RPDFLAADLR GLLRAAPPVE AVPELGNHAY RCGAWSSRVE EGTLHWSGES
YGLGDDASDG DRSGGGHSGG DASDRDMSGD DTWNGDGTDG LDGLRAACAT VWSALDSGVA
VHAIAARRPP GCEDLMAPAP RAPEPVALA
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