| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1214 |
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| Symbol | |
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| ID | 4438716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | - |
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| Start bp | 1119433 |
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| End bp | 1120206 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639676846 |
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| Product | HAD family sugar phosphatase |
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| Protein accession | YP_820599 |
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| Protein GI | 116627980 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000012407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACATATA AAGGTTATTT GATTGATTTA GATGGAACCA TTTATAAGGG GAAGGATCGT
ATTCCTGAAG GGGAGGCCTT TGTTAAGGAG TTGCAGAAGC GCCAGATTCC CTATCTTTTT
GTGACTAATA ACAGTACGCG TACACCAGAG ATGGTCCAAG AGCTTTTGTG TAATCAGTGC
GAGTTGGAAA CGCCTCTTGA AACTATTTAT ACAGCAACCC TGGCGACAGT TGACTACATG
AATGATATGA ATCGTGGTAA GACAGTTTAT GTTATTGGTG AGACTGGGCT TAAATCTGCT
ATTGCGGATG CGGGTTATAC GGTAGATGAG GAAAATCCTG ATTATGTGGT AGTGGGATTG
GACCGTGATG TCACTTATGA AATGCTGGTT AAAGCAACCC TTGCTATCCA TAAAGGGGCT
ATGTTTATTG GGACAAACCC AGATTTGAAT ATCCCAACAG AACGAGGTCT GCTTCCAGGT
GCTGGTTCCC TCTTGGCCCT TATTGAGGCA GCGACGCGTG TGAAACCAAT CATTATTGGT
AAGCCTAAAG CTATTATCAT GAACAAAGCT CTTGAAATCC TTGGAACAGA ACGTAGCCAA
ACTATTGTGG TTGGTGATAA TTACTTGACT GATATTACAG CTGGCATTAA AAATGACTTT
CCAACACTTC TTGTGACGAC TGGTTTCACC AAGGCGGAAG AAGTTGTGGA TTTACCAGTA
AAACCAGACC ATGTACTTGC TAGTCTAGCG GAGTGGGATT TTGATGCGAA CTAA
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| Protein sequence | MTYKGYLIDL DGTIYKGKDR IPEGEAFVKE LQKRQIPYLF VTNNSTRTPE MVQELLCNQC
ELETPLETIY TATLATVDYM NDMNRGKTVY VIGETGLKSA IADAGYTVDE ENPDYVVVGL
DRDVTYEMLV KATLAIHKGA MFIGTNPDLN IPTERGLLPG AGSLLALIEA ATRVKPIIIG
KPKAIIMNKA LEILGTERSQ TIVVGDNYLT DITAGIKNDF PTLLVTTGFT KAEEVVDLPV
KPDHVLASLA EWDFDAN
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