Gene Acel_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1250 
Symbol 
ID4485147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1389940 
End bp1390956 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content73% 
IMG OID639730027 
ProductHAD family hydrolase 
Protein accessionYP_873008 
Protein GI117928457 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0647] Predicted sugar phosphatases of the HAD superfamily 
TIGRFAM ID[TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.395408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCTCGC CGTCGGTACT CCGAGCGACC ACCGGTCCGC TCGCCGACGA ATACGACGCC 
GTCTTCGTCG ACCTCGACGG AGTGGTCTAC ATCGGCGAGG AACCGATTCC GCCGGCTGTT
GCCGGGCTGG CGAAACTCCG GGACGCCGGG ACACGCGTCG TCTTCATCAC CAACAACGCG
TCGCGCACCC CCGAGCAGGT GGCGGACCGG CTCATGCGGC TCGGCGTGGC CGCCGAACCG
GACGACGTCG TCACCTCCGC GCAAGCAGCC GCGACGCTGG TGCGCGACCA CTGTGGGCCG
GGGGCTCGCG TACTCGTGAC CGGAAGCCCG GCGCTCCGGC ATGAACTCCG CGCCGCCGGC
CTCCACCCGG TGGGCAGCGT CGATGATCGG CCGGACGCCG TCGTCCAGGG CTACGCGCCG
GATCTCACCT ATCACGATCT CGCGGAGGCG GCGCTCGCGG TCCAATCCGG CGCGCTCTGG
ATTGCAACAA ACGCCGACAC CACCCTGCCT GACCCGCGCG GCATGCTGCC CGGGAACGGT
GCCCTGGTCG CCGCGGTGGC CACCGCGACT GGACGTCAGC CGCTGATCGC CGGCAAGCCG
GCTCGGGCCC TGTTCGACGA AGCGCGACGT CGTACCGGCG CCGACCGTCC GATCGTCGTC
GGTGACCGGC CGGAGACGGA CGTCGCCGGC GCCCGGGGCG CCGGCATCGA CGTCATGCTC
GTCCTCTCCG GGGTGACCAC GCCGGGTGTC CTCGTCACTG TCCCGCCCGC CCAGCGGCCG
ACCTACCTTG CCGCTGACCT GCTGGGCCTC CTGGACGTGC ACCCGGCGGT GGAGGCGGAT
GCCGGTCGGG CGCGCTGCCG GCGGTGGACG GCGTACGTCG ACGGTGGGCG GGTCGTCCTG
GACGGCGATG GAGACCGGGT TGACGCCCTG CGCGCCGTCC TCGGTTGCGT CTGGTCGGCC
GTGGATGCCG GCGTTGCCCA GCCGGACGCG TCGGAGGCGC TCCGGCGGAT CGGATGA
 
Protein sequence
MTSPSVLRAT TGPLADEYDA VFVDLDGVVY IGEEPIPPAV AGLAKLRDAG TRVVFITNNA 
SRTPEQVADR LMRLGVAAEP DDVVTSAQAA ATLVRDHCGP GARVLVTGSP ALRHELRAAG
LHPVGSVDDR PDAVVQGYAP DLTYHDLAEA ALAVQSGALW IATNADTTLP DPRGMLPGNG
ALVAAVATAT GRQPLIAGKP ARALFDEARR RTGADRPIVV GDRPETDVAG ARGAGIDVML
VLSGVTTPGV LVTVPPAQRP TYLAADLLGL LDVHPAVEAD AGRARCRRWT AYVDGGRVVL
DGDGDRVDAL RAVLGCVWSA VDAGVAQPDA SEALRRIG