| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0800 |
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| Symbol | nagD |
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| ID | 6362914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 920041 |
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| End bp | 921081 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642679966 |
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| Product | putative HAD superfamily sugar phosphatase |
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| Protein accession | YP_001954744 |
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| Protein GI | 189439663 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGTT TCCTCAAAGG CACCGATCGC CCGCTCGCCG AGGCCTATCA GCTTGCGCTG
CTGGACCTCG ACGGCGTGGT GTATCGCGGC AAGAATCCGG TCGAATACGC GGCCGATTCC
ATTCGTGCGG CCGAAGCCGC CGGCATGACC ATCGAATACA CCACGAACAA CTCCTCGCGC
TTCCAGCACG TGGTGGCCGA CCAGCTCAAG GGCTTCGGCT TGGACGTGGA GCCGTGGCAG
GTCATCACCT CTTCGGTGGT GGCCGCCCGT ATGGTGGCCA AGGCGTTGCC CGCCGGCGCG
CGCGTACAGG TATTGGGCGC CGAGCATTTG CGCGATGAGG TCACCCGCAA CGGCCTGACC
ATCGTGGACG GTCCTCAGGA CCGCCCGCAG GCCGTCATTC AGGGCTGGTA TCCGGATATG
ACTTGGCAGA TGATGGCCGA TGCCGCGTTC GCGGTCGAGG CCGGAGCCAC GTATTTCGTG
ACCAACCGCG ACCTAACGAT TCCTCGTGAA CTGGGCATCG CCCCCGGTTG CGGATCGATG
ATTCGCGCCG TGATCACGGC CACCGGCGTC GAACCGGTCG CCTCCGCTGG CAAGCCGGAA
GCGTACATGT ACGATGAGGC CCGCGAACTG AACGCCGCCG AAGGCCACGA TTTGGTGCCC
AAGGAGGCGT CCATCGCCAT TGGCGACCGC CTCGACACCG ATATCGAGGC CGGTAACCGC
GGCGACTACG ATTCGCTGGC GGTGCTGACC GGTGTCACCA ACCCGACCGA ACTGATGCTG
GCTCCGTCAC ACCTGAGGCC CACATTCATC GCCCCTGATC TGCGTGAACT CGGCGAAGCC
CAACCGGAGC CGGTCCGCGA TGAGAGCGGT ACTTGGGAAT GCCGCAAGGC TAGCGCTTGG
TTTGAAAACG GCCAGGTACA CGTCAGCGAC CCCACCAGTA TGGACGGCCT GCGCGCCGCC
GTATGCGCCG CATGGGAAGC CGCCGACCAA GGCGCACAGC TTAGCGAGGC CACGGTACCG
GTGTTCGCCA TCGAGGCATA G
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| Protein sequence | MTRFLKGTDR PLAEAYQLAL LDLDGVVYRG KNPVEYAADS IRAAEAAGMT IEYTTNNSSR
FQHVVADQLK GFGLDVEPWQ VITSSVVAAR MVAKALPAGA RVQVLGAEHL RDEVTRNGLT
IVDGPQDRPQ AVIQGWYPDM TWQMMADAAF AVEAGATYFV TNRDLTIPRE LGIAPGCGSM
IRAVITATGV EPVASAGKPE AYMYDEAREL NAAEGHDLVP KEASIAIGDR LDTDIEAGNR
GDYDSLAVLT GVTNPTELML APSHLRPTFI APDLRELGEA QPEPVRDESG TWECRKASAW
FENGQVHVSD PTSMDGLRAA VCAAWEAADQ GAQLSEATVP VFAIEA
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