Gene Snas_4443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4443 
Symbol 
ID8885645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4734993 
End bp4736075 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content75% 
IMG OID 
ProductHAD-superfamily hydrolase subfamily IIA 
Protein accessionYP_003513181 
Protein GI291301903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.198933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.115883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAG GCCCGCGGGG CGGCTCGCTC GACGACGGTC GGTTGTGGGG CGAGTCGCTG 
CCGCTGAGCC GACGCTACGG TCTGGTGCTG CTGGACCTCG ACGGTGTGGT CTACCTGTTG
GGTGAACCCA TCGACGGGGT GCCGGGGGCG TTGCGGGAGT TGCGGCGGGC CGGGGCGGTT
CCGGTGTTCG TGACCAACAA CGCTTCCCGC CGGGCCGCGG AGGTCGCGGA GCTGTTGTCG
GCCAAGGGCG TCGAGGCGTC GGTGGCCGAG GTGCGCACTT CGGCCCAGGT CGCCGCTGCG
CTGTTGGCCG AGCACTGTGA GCCTGGCAGC CGGGTGCTGG TGGTCGGGTC GGAGGCGCTG
GCCGAGGAGG TCGCCGAGGC GGGTCTGACG CCGGTGGAGT CCGCGAACGG CCGCAAGGTC
GCCGCCGTGG TGCAGGGTTA TGGGCGCACG GTGACCTGGC AGCGGCTGGC CGAGGCGGTG
GTCGCGGTGC GCGAGGGCGC GTGGTGGCTG GCCTCCAACA CCGACAAGAC GATGCCGTCG
CCGCTGGGGC CGTTGCCGGG CAACGGAACC CTGGTGGCGG CGGTGGGCAC CGCCCTGGGG
CGGCAGCCGG ACGCGGTGGC CGGTAAACCC GCTCCGGCGA TGCTGCGGCA GGCCGTGGCC
GCCCATCCTG GCCGGGACGC GATCATGGTC GGCGACCGTT GGGACACCGA CATCGCTGGT
GCCCACGCCG CGGGCCTGCC GGGCCTGCTG GTGTTGAGCG GTTCGATCTC GGCCCCGGAG
GTGCTGGAGT TGCCGCCGCA GGGGCGGCCG CAGTTCCTGG CGTGGACGGT GGCCGGGATC
AACGAGCCGC ACCCGCCGGT GCGCGTCGAG GCGGGCGAGC CGACACGGTT TCGCTGCCGG
GACTGGAGTG TCAGCGTCAC GGACGGCAAG TCGCGGCTGG CCGGGGACGG CGACGCCCTG
GACGCGCTGC GAGCCCTGGC GCAGGCCGCC TGGTGGTCGC GGGATCGCGA CGCCGGGGTG
GCGGGAACGC CGGTCGCCGA CGGGGAGTCG GCGGCCCGGG CACTGGCGCG GCTGGGGTTC
TAG
 
Protein sequence
MTKGPRGGSL DDGRLWGESL PLSRRYGLVL LDLDGVVYLL GEPIDGVPGA LRELRRAGAV 
PVFVTNNASR RAAEVAELLS AKGVEASVAE VRTSAQVAAA LLAEHCEPGS RVLVVGSEAL
AEEVAEAGLT PVESANGRKV AAVVQGYGRT VTWQRLAEAV VAVREGAWWL ASNTDKTMPS
PLGPLPGNGT LVAAVGTALG RQPDAVAGKP APAMLRQAVA AHPGRDAIMV GDRWDTDIAG
AHAAGLPGLL VLSGSISAPE VLELPPQGRP QFLAWTVAGI NEPHPPVRVE AGEPTRFRCR
DWSVSVTDGK SRLAGDGDAL DALRALAQAA WWSRDRDAGV AGTPVADGES AARALARLGF