| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2038 |
|---|
| Symbol | |
|---|
| ID | 3580795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 2382226 |
|---|
| End bp | 2383230 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637685731 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_290094 |
|---|
| Protein GI | 72162437 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTGC TGACCGCATC CCAACCGCTG CACTCGCTGT ACGACGCGGC CCTCATCGAC
TTGGATGGGG TCGTCTACCT TGGCCCACGT GTAGTCCCCG CTGCCCCGGA AGCGGTAGCG
AAGGCGCGCG CCCAAGGCAT GCGGGTGGCT TTCGTGACCA ACAATGCGTC GCGTACCCCG
GCTGCTGTTG CCGAGCACCT CACCGCCCTG GGGGTAACCG CGGCAGCCGA CGAAGTGGTC
ACCTCCGCCC AGGCCGCGGC CCGCCTGATC GCGGAACGGT TTCCCCCCGG ATCACCGGTA
CTGGTCGTCG GGGACACCGG GCTGCGCCAG GCAGTGCGGG CCCACGGCCT GCGCCCGGTG
ACGACCATCC ACGACCGCCC AGTCGCTGTA GTCCAGGGAT ATTCCCCCCG GCTCGGTTTC
GATCTGGCTG TTGAAGGAGC GTTGGCCGTG GCCGCGGGCG CGCTGTTCGT GGTCAGCAAC
AACGACGCTA CGGCCCCCAT GGGTCGCGGT ATCCAGCCGG GCAACGGGTC CTTTGCCCGA
GTGATCGCCC ACGCCACCCA CCAGGAACCG CTTGTGGCAG GCAAACCGGA ACCCCCCTTG
CATGAGGAGG GGGTGCGCCG CACCGGTGCC GTCAACCCCC TGGTGATCGG TGACCGCTTG
GACACCGATA TCGAAGGTGC ACACCGGCGC GGTGCAGCGA GCATGCTGGT CCTCACCGGG
GTGACCACCC CGGTGGATCT CCTCCTCGCC CCGCCGCAGC GTCGGCCCTC CTACCTCGCC
TACGACATTG GCGGACTCAA CGAACCCCAT CCCGAAGTGC TGTGGGACGG TCGCGAAGCG
CGCTGCGGAG GATGGACTGC GACAGTCCAC TCAGACCGGC TGCTCTTGCA GGGGTCCGGG
GAACGGCTGG ACGGCCTGCG CGCCCTCTGT GTCGCGGCAT GGCAGAGCGG CCGCGTGTTC
GCCCCCGACT CTCTCCACGA AGTCACTGGC ATCCTCGGCT GGTAA
|
|---|
| Protein sequence | MTLLTASQPL HSLYDAALID LDGVVYLGPR VVPAAPEAVA KARAQGMRVA FVTNNASRTP
AAVAEHLTAL GVTAAADEVV TSAQAAARLI AERFPPGSPV LVVGDTGLRQ AVRAHGLRPV
TTIHDRPVAV VQGYSPRLGF DLAVEGALAV AAGALFVVSN NDATAPMGRG IQPGNGSFAR
VIAHATHQEP LVAGKPEPPL HEEGVRRTGA VNPLVIGDRL DTDIEGAHRR GAASMLVLTG
VTTPVDLLLA PPQRRPSYLA YDIGGLNEPH PEVLWDGREA RCGGWTATVH SDRLLLQGSG
ERLDGLRALC VAAWQSGRVF APDSLHEVTG ILGW
|
|---|
| |