| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0894 |
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| Symbol | |
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| ID | 8322958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 916676 |
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| End bp | 917458 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952028 |
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| Product | HAD-superfamily hydrolase, subfamily IIA |
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| Protein accession | YP_003109512 |
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| Protein GI | 256371688 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.698447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCTGGC TCATCGACCT GGACGGCGTC GTGTGGCGCT CGAGCACCCT CATCGAAGGC
TCCGACCGAG CGATCAGGCG CATTCGTGAT CGTGGCGACG ATCTGCGCTT CGTCACCAAC
AACTCCACTC TCACCGTCGA AGCTTACGTC GCGAAGCTCC GCTCACTCGG GATCGACGCC
GACGCCAACG AGATCCTCAC CTCCGCCCTT GCCGCACGTC TCGCGCTCGG CAGTGACCAG
CGCGTGCTGG CGATCGGCGA GGAAGGACTG ACGAGCGTCG TCGCCGAGGG CAACACGCTC
GTGAGGCCCA CGTCCCTCGA GGACGCCGAG AAGGTCGACG CGGTCGTCAT GGGCTGGCAC
CGAGGCTTCA CATGGGATCT TCTCGCGCAG GCCTGTGTCG CGATCCGCGC GGGGGCCCGA
TTCCTCGCGA CCAACCGAGA CCCGACCTAC CCGCTCGAAC GACTCGTCGT CCCGGGAACC
GGCGCGCTCG TCGCGAGCCT CGTCGCTTCG ACCTCGGTGG AACCGACCTA CTGCGGCAAG
CCCGACTGGC CCATGGTCGA GCTTGTGCGA CCCCACCTCG GTGCCACATC GACGATCATG
GTGGGTGACC GCCTCACCAC GGACGGAGCC TTCGCCAGGG CACTCGAGAT TCCCTTTGCC
CTCGCCGCCT CCGGCATCGC GGAGCACGAC GACGGCACCA CACCCGTGGC GGTCCGCGCC
GCCGATCTGC TCGGCGTCGT CACCGCGATC GACGCCGACC CAACGATCCT GCACGCCCAC
TGA
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| Protein sequence | MRWLIDLDGV VWRSSTLIEG SDRAIRRIRD RGDDLRFVTN NSTLTVEAYV AKLRSLGIDA
DANEILTSAL AARLALGSDQ RVLAIGEEGL TSVVAEGNTL VRPTSLEDAE KVDAVVMGWH
RGFTWDLLAQ ACVAIRAGAR FLATNRDPTY PLERLVVPGT GALVASLVAS TSVEPTYCGK
PDWPMVELVR PHLGATSTIM VGDRLTTDGA FARALEIPFA LAASGIAEHD DGTTPVAVRA
ADLLGVVTAI DADPTILHAH
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