Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_34110 |
Symbol | |
ID | 8388735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3713695 |
End bp | 3714489 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644977433 |
Product | predicted sugar phosphatase of HAD superfamily |
Protein accession | YP_003135202 |
Protein GI | 257057370 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
TIGRFAM ID | [TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457 [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.800157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGAGC AGCAGTGGAA CTACCTCACC GACATGGACG GCGTGCTGGT GCACGAGGAG CATCCCGTGC CCGGGGCCGA CGAGTTCCTC GCCGAACTGA GAGCGAACGG GGCACGGTTC CTCGTACTGA CCAACAACTC GATCTACACG CCCCGCGATC TGCGTGCGCG ATTGGCCCGT TCGGGATTGG ACGTGCCGGA GGAGGCCATC TGGACGTCCG CGTTGGCCAC TGCGCGGTTC CTGAGCAATC AGCGACCGGG CGGTTCGGCG TTCGTGATCG GTGAGGCCGG GCTCACCACG GCGCTGCACG AAGCCGGTTA CGTGCTCACC GACATCGACC CCGACTACGT CGTGCTGGGG GAGACCCGCA CCTACAGTTT CACCGCCATC ACCAGGGCCA TCCGGCTGAT CGAACGGGGG GCGAGGTTCA TCGCCACCAA CCCCGACGCG ACGGGGCCGA GCCGGGAGGG GGTGCTGCCC GCCACCGGTT CCGTGGCCGC GCTCATCGAA CGCGCCACCG GCCAGTCGCC CTACTACATC GGCAAGCCGA ATCCGTTGAT GATGCGGTCG GCGCTGCGGG CTCTCGGCGC GCACAGCGAA CACACGATCA TGATCGGTGA CCGGATGGAC ACCGACATCC ATTCGGGGAT CGAGGCCGGT CTGCAGACCG TGCTCGTGCT CAGCGGCATC GCCACGCGCG AGTCGGCCGA GCGCTACCCG TTCCGGCCGA CCCTGGTCGT CAACTCGATA GCCGACCTCG TCGGGCGCAC CCACGACCCG TTTCGGGCGG GCTGA
|
Protein sequence | MTEQQWNYLT DMDGVLVHEE HPVPGADEFL AELRANGARF LVLTNNSIYT PRDLRARLAR SGLDVPEEAI WTSALATARF LSNQRPGGSA FVIGEAGLTT ALHEAGYVLT DIDPDYVVLG ETRTYSFTAI TRAIRLIERG ARFIATNPDA TGPSREGVLP ATGSVAALIE RATGQSPYYI GKPNPLMMRS ALRALGAHSE HTIMIGDRMD TDIHSGIEAG LQTVLVLSGI ATRESAERYP FRPTLVVNSI ADLVGRTHDP FRAG
|
| |