| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1122 |
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| Symbol | |
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| ID | 8380299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1200568 |
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| End bp | 1201596 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003867 |
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| Product | HAD-superfamily hydrolase, subfamily IIA |
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| Protein accession | YP_003161081 |
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| Protein GI | 256832354 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.706316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGAAC AGTACCTTCA GCACAGTGAG GTACCGCTCT CGCAGCGGTA CCCACTGGCA
CTTGTTGACC TCGACGGAGT AGCCTACAAA GGGCACGAAC CCATTAACCA TGCGTCAGAT
GGGCTGAACG CCGCTCGACA ACACGGTATG CGCCTCGTGT TTGTCACAAA CAACGCATCA
CGAGAACCGC AAGACGTCGC GCAACAATTG ACTAGCCTCG ACATCCCAGC TCACAGCGAC
GACGTCATGA CTGCAGCACA AGCATGTGCC CGCCTCCTCA CACAACACGT TGAACCAGGC
GCAAAAGTGC TCGTCATCGG TGGCGCTGGT CTGCGCACGG CAGTACACGA AGCGGGATAC
ACCATCGTAG AGTCAGCTGA CGACAACCCC ATCGCAGTTG CCCAGGGGTT CGCGCCCACT
CTAGGGTGGA AAGACCTCGC TGAAGCAGCA TACGCAGTAA CAGCAGGTGC TCTCCATGTT
GCATCCAACC TCGATCTCTC CCTGCCCACA GCGAGGGGAT TCGCTCCAGG AAATGGATCG
CTCGTTGGAG CGGTAAAAGC AGCTACAGGG GTCGAGCCAC TCAGTGCCGG AAAACCATCG
CCAGCCATGT ACCACATGGC CATCGAACGA GCAGGGGCAT CAACCGCACT AGTGATCGGC
GACCGCCTTG ACACCGACCT AGCCGGAGCA CGAGCGGGCG GACTCCACGG TTTGCACGTA
CTCACAGGTG TGTCAACAAT CCGAGACGCC ATCAACGCTT CACCTATAGA GCGTCCCCAC
TACCTCGCCT GTGACCTTCG CGCCCTCACA ACAACCCACC CCGCTGTGAC GCAACGAAAT
GGCTGGTGGG TATGTGGAGC ATCTGCTGTC AGAGTGGTGG ACAGTGCGCT TGAAGTATGG
GAATCAGACG ACAGCGAAGG AAGCCCTGAC GGACTTGATC CAGCACGGGC TGCGTGCGTT
GCAGCCTGGA ACTACGCCGA CACCCATCCC ACCACCACTC AATTCGACTT ACCAGAAGCG
CTCGTATAG
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| Protein sequence | MTEQYLQHSE VPLSQRYPLA LVDLDGVAYK GHEPINHASD GLNAARQHGM RLVFVTNNAS
REPQDVAQQL TSLDIPAHSD DVMTAAQACA RLLTQHVEPG AKVLVIGGAG LRTAVHEAGY
TIVESADDNP IAVAQGFAPT LGWKDLAEAA YAVTAGALHV ASNLDLSLPT ARGFAPGNGS
LVGAVKAATG VEPLSAGKPS PAMYHMAIER AGASTALVIG DRLDTDLAGA RAGGLHGLHV
LTGVSTIRDA INASPIERPH YLACDLRALT TTHPAVTQRN GWWVCGASAV RVVDSALEVW
ESDDSEGSPD GLDPARAACV AAWNYADTHP TTTQFDLPEA LV
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