| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0563 |
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| Symbol | |
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| ID | 5189936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 621707 |
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| End bp | 622477 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640590370 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001271168 |
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| Protein GI | 148543798 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0984026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGATT ATCAAGGATA CTTTATTGAT TTAGATGGGA CTACTTATAA GGGGAAGGAA
CGGATTCCAG CAGCCGGAAG ATTTATCAAA CGACTACAAG AAGCAGGGAA AGAGGTTCTA
TTTGTAACAA ACAACAGTAC CCGAACACCA GATTTTGTCG CTGAAAACCT CCGTAAAAAT
CATGATATTA ATGTTACCGC GGAAAACGTA TATACAACAG CAATCGCAAC CGCTGACTAT
TTACGGTCAA TAGCACCAGC AAAAAGCAAG ATTTATGTTA TTGGTGAGTC GGGATTAAAG
TTAGCTTTAG AAAAGCGTGG TTTTATCTTG ACTGATGATC AACCTGAATA TGTAGTTGTC
GGTTTAGATA CGAGTGTTAC TTATGAAAAA CTTGAAAAAG CAGTTTTGTT AATTCGAAGT
GGCGCTAAAT TTATCGGTAC TAATGCTGAT AGTAATCTGC CAAATGAGCG AGGGATGGTT
CCAGGAGCAG GTTCGATTGT AAAGTTAATA GAATATGCAA CCCAAACGAA ACCTGTGATG
ATTGGTAAAC CAGAAGCTAT AATTATGAAA ATGGCACTTG AAAGAGTTCA ATTACCTAAA
GAGAAGGTAA TTATGGTCGG CGATAACTAT CACACTGATA TTGAGGCAGC AATTAATGTC
GGGATGGATA GTTTGTTAGT ATATACTGGT TTATCGCGCC CAGAAGAAGT TATAAAAGAA
AAAATTCAGC CAACGTATAA GGTGAATAAT CTTGATGAAT GGAAGATTTG A
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| Protein sequence | MKDYQGYFID LDGTTYKGKE RIPAAGRFIK RLQEAGKEVL FVTNNSTRTP DFVAENLRKN
HDINVTAENV YTTAIATADY LRSIAPAKSK IYVIGESGLK LALEKRGFIL TDDQPEYVVV
GLDTSVTYEK LEKAVLLIRS GAKFIGTNAD SNLPNERGMV PGAGSIVKLI EYATQTKPVM
IGKPEAIIMK MALERVQLPK EKVIMVGDNY HTDIEAAINV GMDSLLVYTG LSRPEEVIKE
KIQPTYKVNN LDEWKI
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