| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5443 |
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| Symbol | |
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| ID | 8329645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6460489 |
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| End bp | 6461283 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644945880 |
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| Product | HAD-superfamily hydrolase, subfamily IIA |
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| Protein accession | YP_003103108 |
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| Protein GI | 256379448 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.931975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCTGC TGTCCCGCTA CGACGCACTG CTGCTGGATC TCGACGGCAC GGTCTACCGG
GGGCACGCGC CCGTCCCCGG CGCGCCCGAG GCGGTCGCCG CCGCTCGGGC GGCCGGGCTC
GCGATCCGGT TCGTCACCAA CAACGCCTCG CGGTCGCCGC AGGAGGTCGC CGACCACCTG
ACCGAGATCG GGTTCGCGCC CGCGCTCGAC GAGGTGTCCA CGAGCGCGCA GGCCGCCGCG
TCCATGCTCG CCGACCTCGT CCCCGCCGGG TCCACGGTGC TGGTGCTGGG AACCGAGGCG
CTGGTGGAGC AGGTGCGGCA GCGCGGGCTC GTGCCCACGC GCACCGCCGA CGGGGCCGTC
GCGGTCATCC AGGGGCTCTC CCAGGACACC GGGTGGCGCG AGCTGGCCGA GGCGTGCGTG
GCGGTCCGCG CGGGCGCGGT GTGGGTGGCG TGCAACGTCG ACCTGACGCT GCCCACCGAG
CGCGGGCTGC TGCCCGGCAG CGGGTCGCTG GTCCGGGCGC TCATGGCGGC CACGGACGCC
GAGCCGCTCG TCGCGGGCAA GCCCGCCGTG CCGCTGCTGG AGCAGGCGGC CAAGTCCGCT
GGCGCGCAGC GACCGCTCGT GGTCGGCGAC CGGCTCGACA CCGACATCGC GGGCGCCTGC
AACGCGGGCA TGGACTCGCT CCTGGTGCTC ACCGGGGTGT CCACCCGCGA GGAGGCCATG
GCGCTCCCGG AGGACCAGCG GCCCACCCAC ATCGCCGACG ACCTGTCGGT GCTATCGGCT
ACCGTGGAAG GGTGA
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| Protein sequence | MTLLSRYDAL LLDLDGTVYR GHAPVPGAPE AVAAARAAGL AIRFVTNNAS RSPQEVADHL
TEIGFAPALD EVSTSAQAAA SMLADLVPAG STVLVLGTEA LVEQVRQRGL VPTRTADGAV
AVIQGLSQDT GWRELAEACV AVRAGAVWVA CNVDLTLPTE RGLLPGSGSL VRALMAATDA
EPLVAGKPAV PLLEQAAKSA GAQRPLVVGD RLDTDIAGAC NAGMDSLLVL TGVSTREEAM
ALPEDQRPTH IADDLSVLSA TVEG
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